CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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PGSC0003DMG400043218
(
Solanum tuberosum
)
MADS box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00319 (SRF-TF)
IPR002100
PGSC0003DMG400043218
T255716_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
PGSC0003DMT400093647
MADS box
3
50
KIENEDARYTAFSKRRSTLYKKASELVGKYDVDVGITLFSPTDKPYSF
Links
Other
MADS box
family TFs
Other
Solanum tuberosum
TFs
2 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Cagra.3527s0039
Capsella grandiflora
Cagra.3527s0039
N
Carubv10016801m.g
Capsella rubella
Carubv10016801m.g
N
scaffold_503237.1
Arabidopsis lyrata
scaffold_503237.1
N
Thhalv10005835m.g
Eutrema salsugineum
Thhalv10005835m.g
N