PV07_11277 (Cladophialophora immunda)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00319 (SRF-TF) IPR002100 PV07_11277 T255991_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
SMP1
M01557_2.00 		Saccharomyces cerevisiae
TTAATAAA
TTTATTAA		 PBM
Zhu et al.(2009)
Smp1 		0.729 0.729
SMP1
M08587_2.00 		Saccharomyces cerevisiae
BNDBMYWYAATTRWRNNWVNN
NNBWNNYWYAATTRWRKVHNV		 Misc
DeBoer et al.(2011)
YBR182C_864 		0.729 0.729
RLM1
M08590_2.00 		Saccharomyces cerevisiae
NTAWWWWTAG
CTAWWWWTAN		 Misc
DeBoer et al.(2011)
YPL089C_419 		0.729 0.729
RLM1
M08459_2.00 		Saccharomyces cerevisiae
NDWTCTAWWWATAGMYHN
NDRKCTATWWWTAGAWHN		 COMPILED
Mathelier et al.(2014)
MA0369.1 		0.729 0.729
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
KIW23045 MADS box 10 57

Links

Other MADS box family TFs
Other Cladophialophora immunda TFs

240 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BCL11A Callithrix jacchus ENSCJAG00000009226 I 0.000
BCL11A Pan troglodytes ENSPTRG00000011944 N 0.000
BCL11A Otolemur garnettii ENSOGAG00000024696 N 0.000
BCL11A Homo sapiens ENSG00000119866 D 0.000
BCL11A Ornithorhynchus anatinus ENSOANG00000012402 I 0.000
Bcl11a Mus musculus ENSMUSG00000000861 I 0.000
bcl11a.L Xenopus laevis XB-GENE-865631 N 0.000
bcl11aa Tetraodon nigroviridis ENSTNIG00000004033 N 0.000
ENSECAG00000008094 Equus caballus ENSECAG00000008094 N 0.000
ENSFALG00000002563 Ficedula albicollis ENSFALG00000002563 N 0.000
ENSFALG00000011123 Ficedula albicollis ENSFALG00000011123 I 0.000
ENSLACG00000003560 Latimeria chalumnae ENSLACG00000003560 I 0.000
ENSMICG00000017139 Microcebus murinus ENSMICG00000017139 N 0.000
ENSMMUG00000011303 Macaca mulatta ENSMMUG00000011303 I 0.000
ENSMODG00000002114 Monodelphis domestica ENSMODG00000002114 N 0.000
ENSMPUG00000003031 Mustela putorius furo ENSMPUG00000003031 N 0.000
ENSOARG00000001663 Ovis aries ENSOARG00000001663 N 0.000
ENSOCUG00000024296 Oryctolagus cuniculus ENSOCUG00000024296 I 0.000
ENSPPYG00000012393 Pongo abelii ENSPPYG00000012393 N 0.000
ENSXMAG00000004749 Xiphophorus maculatus ENSXMAG00000004749 N 0.000
im:7142702 Takifugu rubripes ENSTRUG00000018074 I 0.000
Myotis_brandtii_Bcl11a_10034311 Myotis brandtii Myotis_brandtii_Bcl11a_10034311 N 0.000