CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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SAPIO_CDS1437
(
Scedosporium apiospermum
)
MADS box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00319 (SRF-TF)
IPR002100
SAPIO_CDS1437
T256028_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
SMP1
M01557_2.00
Saccharomyces cerevisiae
TTAATAAA
TTTATTAA
PBM
Zhu et al.(2009)
Smp1
0.771
0.771
SMP1
M08587_2.00
Saccharomyces cerevisiae
BNDBMYWYAATTRWRNNWVNN
NNBWNNYWYAATTRWRKVHNV
Misc
DeBoer et al.(2011)
YBR182C_864
0.771
0.771
RLM1
M08590_2.00
Saccharomyces cerevisiae
NTAWWWWTAG
CTAWWWWTAN
Misc
DeBoer et al.(2011)
YPL089C_419
0.708
0.708
RLM1
M08459_2.00
Saccharomyces cerevisiae
NDWTCTAWWWATAGMYHN
NDRKCTATWWWTAGAWHN
COMPILED
Mathelier et al.(2014)
MA0369.1
0.708
0.708
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
KEZ46028
MADS box
10
57
PIKDDRNRSVTFLKRKGGLFKKAHELSVLCSVDVAVFIFGTNKKLYEY
Links
Other
MADS box
family TFs
Other
Scedosporium apiospermum
TFs
238 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BBA_09380
Beauveria bassiana
BBA_09380
N
0.000
CCM_08564
Cordyceps militaris
CCM_08564
N
0.000
CFIO01_02535
Colletotrichum fioriniae
CFIO01_02535
N
0.000
CGGC5_7905
Colletotrichum gloeosporioides
CGGC5_7905
N
0.000
CH063_12002
Colletotrichum higginsianum
CH063_12002
N
0.000
Cob_06895
Colletotrichum orbiculare
Cob_06895
N
0.000
CPUR_04268
Claviceps purpurea
CPUR_04268
N
0.000
CSUB01_08191
Colletotrichum sublineola
CSUB01_08191
N
0.000
FFUJ_09949
Fusarium fujikuroi
FFUJ_09949
N
0.000
fgenesh1_pm.sca_11_chr8_3_0000161
Nectria haematococca
fgenesh1_pm.sca_11_chr8_3_0000161
N
0.000
FGRRES_04459
Fusarium graminearum
FGRRES_04459
N
0.000
FOXG_13751
Fusarium oxysporum
FOXG_13751
N
0.000
FPSE_09905
Fusarium pseudograminearum
FPSE_09905
N
0.000
GGTG_02165
Gaeumannomyces graminis
GGTG_02165
N
0.000
GLRG_08213
Colletotrichum graminicola
GLRG_08213
N
0.000
MAJ_04177
Metarhizium majus
MAJ_04177
N
0.000
MAM_07880
Metarhizium album
MAM_07880
N
0.000
MANI_115749
Metarhizium anisopliae
MANI_115749
N
0.000
MBR_01746
Metarhizium brunneum
MBR_01746
N
0.000
MGU_02426
Metarhizium guizhouense
MGU_02426
N
0.000
NechaG95819
Fusarium solani
NechaG95819
N
0.000
OCS_01728
Ophiocordyceps sinensis
OCS_01728
N
0.000
S40285_04994
Stachybotrys chlorohalonata
S40285_04994
N
0.000
S40288_00719
Stachybotrys chartarum
S40288_00719
N
0.000
UV8b_1420
Ustilaginoidea virens
UV8b_1420
N
0.000
VDAG_03761
Verticillium dahliae
VDAG_03761
N
0.000
VDBG_02844
Verticillium alfalfae
VDBG_02844
N
0.000
VDBG_02844
Verticillium albo atrum
VDBG_02844
N
0.000
X797_002271
Metarhizium robertsii
X797_002271
N
0.000