CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
Pm025575
(
Prunus mume
)
MADS box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00319 (SRF-TF)
IPR002100
Pm025575
T257082_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Pm025575
MADS box
11
58
LIPNEGTRKMTFRKRKKSIYKKADELSKLCGIDVCLIVYEADQKKGRA
Links
Other
MADS box
family TFs
Other
Prunus mume
TFs
10 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Pavir.Bb03235
Panicum virgatum
Pavir.Bb03235
N
Pavir.Ca02446
Panicum virgatum
Pavir.Ca02446
N
Pavir.Ea04012
Panicum virgatum
Pavir.Ea04012
N
Pavir.Ga01302
Panicum virgatum
Pavir.Ga01302
N
Pavir.Ha00557
Panicum virgatum
Pavir.Ha00557
N
Pavir.Ib01266
Panicum virgatum
Pavir.Ib01266
N
Pavir.J00899
Panicum virgatum
Pavir.J00899
N
Pavir.J08512
Panicum virgatum
Pavir.J08512
N
Pavir.J11932
Panicum virgatum
Pavir.J11932
N
Pavir.J13524
Panicum virgatum
Pavir.J13524
N
Pavir.J35510
Panicum virgatum
Pavir.J35510
N
Pavir.J36445
Panicum virgatum
Pavir.J36445
N
Pavir.J36563
Panicum virgatum
Pavir.J36563
N