fgeneshPB_pg.42__110 (Phycomyces blakesleeanus)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00319 (SRF-TF) IPR002100 fgeneshPB_pg.42__110 T257363_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
srfA
M02283_2.00 		Dictyostelium discoideum
MYDWWWNNRD
HYNNWWWHRK		 PBM
Weirauch et al.(2014)
pTH5539 		0.721 0.721
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
fgeneshPB_pg.42__110 MADS box 44 86

Links

Other MADS box family TFs
Other Phycomyces blakesleeanus TFs

52 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ARB_02013 Arthroderma benhamiae ARB_02013 I 0.811
Bcin09g06140 Botrytis cinerea Bcin09g06140 I 0.744
BGHDH14_bgh04421 Blumeria graminis BGHDH14_bgh04421 I 0.744
CFIO01_12657 Colletotrichum fioriniae CFIO01_12657 I 0.744
CGGC5_4984 Colletotrichum gloeosporioides CGGC5_4984 I 0.800
CH063_12904 Colletotrichum higginsianum CH063_12904 I 0.744
Cob_05053 Colletotrichum orbiculare Cob_05053 I 0.744
CSUB01_05290 Colletotrichum sublineola CSUB01_05290 I 0.744
CTHT_0012860 Chaetomium thermophilum CTHT_0012860 I 0.744
DACRYDRAFT_57073 Dacryopinax sp DACRYDRAFT_57073 I 0.744
E5Q_02524 Mixia osmundae E5Q_02524 I 0.721
EDP41437.1 Malassezia globosa EDP41437.1 I 0.721
estExt_fgenesh1_pm.C_50209 Cryphonectria parasitica estExt_fgenesh1_pm.C_50209 I 0.744
estExt_fgeneshMC_pm.C_40429 Mucor circinelloides estExt_fgeneshMC_pm.C_40429 I 0.767
EV44_g1435 Erysiphe necator EV44_g1435 I 0.744
e_gw1.1.687.1 Phycomyces blakesleeanus e_gw1.1.687.1 I 0.767
e_gw1.2.1101.1 Mucor circinelloides e_gw1.2.1101.1 I 0.767
e_gw1.4.1161.1 Mucor circinelloides e_gw1.4.1161.1 I 0.767
e_gw1.6.1281.1 Mucor circinelloides e_gw1.6.1281.1 I 0.767
fgeneshPB_pg.1__662 Phycomyces blakesleeanus fgeneshPB_pg.1__662 I 0.767
GGTG_11623 Gaeumannomyces graminis GGTG_11623 I 0.744
GLOINDRAFT_82941 Rhizophagus irregularis GLOINDRAFT_82941 I 0.767
GLRG_02553 Colletotrichum graminicola GLRG_02553 I 0.744
GMDG_07017 Pseudogymnoascus destructans GMDG_07017 I 0.744
gw1.27.105.1 Phycomyces blakesleeanus gw1.27.105.1 I 0.767
gw1.3.516.1 Phycomyces blakesleeanus gw1.3.516.1 I 0.767
gw1.5.917.1 Mucor circinelloides gw1.5.917.1 I 0.767
gw1.8.565.1 Mucor circinelloides gw1.8.565.1 I 0.767
J056_002827 Wallemia ichthyophaga J056_002827 I 0.744
LDEC007646 Leptinotarsa decemlineata LDEC007646 I 0.750
M408DRAFT_79374 Serendipita vermifera M408DRAFT_79374 I 0.744
MAPG_02274 Magnaporthe poae MAPG_02274 I 0.744
MBM_07319 Marssonina brunnea MBM_07319 I 0.744
MGG_02773 Magnaporthe oryzae MGG_02773 I 0.744
OIDMADRAFT_123333 Oidiodendron maius OIDMADRAFT_123333 I 0.744
PAXRUDRAFT_829045 Paxillus rubicundulus PAXRUDRAFT_829045 I 0.744
PFICI_14124 Pestalotiopsis fici PFICI_14124 I 0.744
PIIN_00796 Piriformospora indica PIIN_00796 I 0.744
PredSwiss_CON2346.1 Pneumocystis carinii PredSwiss_CON2346.1 I 0.744
PSEUBRA_SCAF3g03688 Pseudozyma brasiliensis PSEUBRA_SCAF3g03688 I 0.721
RO3G_00948 Rhizopus oryzae RO3G_00948 I 0.767
RO3G_06121 Rhizopus oryzae RO3G_06121 I 0.767
RO3G_11614 Rhizopus oryzae RO3G_11614 I 0.767
RO3G_15079 Rhizopus oryzae RO3G_15079 I 0.767
SBOR_8145 Sclerotinia borealis SBOR_8145 I 0.744
SPPG_06208 Spizellomyces punctatus SPPG_06208 I 0.744
SS1G_05588 Sclerotinia sclerotiorum SS1G_05588 I 0.744
TRV_05844 Trichophyton verrucosum TRV_05844 I 0.811
UREG_04511 Uncinocarpus reesii UREG_04511 I 0.789
V499_08986 Pseudogymnoascus pannorum V499_08986 I 0.744
VDAG_01770 Verticillium dahliae VDAG_01770 I 0.744
WALSEDRAFT_9958 Wallemia sebi WALSEDRAFT_9958 I 0.744