CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
Bostr.2570s0298
(
Boechera stricta
)
MADS box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00319 (SRF-TF)
IPR002100
Bostr.2570s0298
T257610_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
AGL57
M10917_2.00
Arabidopsis thaliana
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$AT3G04100_01
0.875
0.875
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Bostr.2570s0298.1.p
MADS box
21
68
KVENYGDRMITFSKRKAGIFKKMNEIIAMCDVEVAFLVFSQAGKPYTF
Links
Other
MADS box
family TFs
Other
Boechera stricta
TFs
6 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ENSCSAG00000001728
Chlorocebus sabaeus
ENSCSAG00000001728
N
ENSMEUG00000005526
Macropus eugenii
ENSMEUG00000005526
N
ENSPANG00000018583
Papio anubis
ENSPANG00000018583
N
ENSSTOG00000013441
Ictidomys tridecemlineatus
ENSSTOG00000013441
N
FIZ1
Homo sapiens
ENSG00000179943
N
FIZ1
Macaca mulatta
ENSMMUG00000006773
N
FIZ1
Otolemur garnettii
ENSOGAG00000025943
N
FIZ1
Pan troglodytes
ENSPTRG00000011518
N