Carubv10003757m.g (Capsella rubella)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00319 (SRF-TF) IPR002100 Carubv10003757m.g T257738_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Carubv10003757m MADS box 10 55

Links

Other MADS box family TFs
Other Capsella rubella TFs

5 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSAMEG00000018009 Ailuropoda melanoleuca ENSAMEG00000018009 I
ENSCSAG00000007633 Chlorocebus sabaeus ENSCSAG00000007633 I
ENSECAG00000015450 Equus caballus ENSECAG00000015450 I
ENSMEUG00000007667 Macropus eugenii ENSMEUG00000007667 I
ENSMPUG00000012204 Mustela putorius furo ENSMPUG00000012204 I
ENSNLEG00000011782 Nomascus leucogenys ENSNLEG00000011782 I
ENSOANG00000015049 Ornithorhynchus anatinus ENSOANG00000015049 I
ENSOARG00000005141 Ovis aries ENSOARG00000005141 I
ENSOPRG00000005862 Ochotona princeps ENSOPRG00000005862 I
ENSP00000362748-D1 Bos grunniens ENSP00000362748-D1 I
ENSPANG00000022122 Papio anubis ENSPANG00000022122 I
ENSPPYG00000002393 Pongo abelii ENSPPYG00000002393 I
ENSSTOG00000001527 Ictidomys tridecemlineatus ENSSTOG00000001527 I
ENSTSYG00000006963 Tarsius syrichta ENSTSYG00000006963 I
Myotis_brandtii_TET1_10018894 Myotis brandtii Myotis_brandtii_TET1_10018894 I
TET1 Dasypus novemcinctus ENSDNOG00000018763 I
TET1 Bos taurus ENSBTAG00000037756 I
TET1 Canis familiaris ENSCAFG00000013739 I
TET1 Vicugna pacos ENSVPAG00000011820 I
TET1 Tursiops truncatus ENSTTRG00000001566 I
TET1 Callithrix jacchus ENSCJAG00000019005 I
TET1 Cavia porcellus ENSCPOG00000009306 I
TET1 Sorex araneus ENSSARG00000011693 I
Tet1 Rattus norvegicus ENSRNOG00000000277 I
TET1 Pteropus vampyrus ENSPVAG00000003593 I
TET1 Pan troglodytes ENSPTRG00000002558 I
TET1 Monodelphis domestica ENSMODG00000017310 I
TET1 Procavia capensis ENSPCAG00000007795 I
TET1 Echinops telfairi ENSETEG00000015118 I
TET1 Felis catus ENSFCAG00000012673 I
TET1 Otolemur garnettii ENSOGAG00000034454 I
TET1 Oryctolagus cuniculus ENSOCUG00000013277 I
TET1 Homo sapiens ENSG00000138336 D
TET1 Gorilla gorilla ENSGGOG00000011822 I
TET1 Loxodonta africana ENSLAFG00000006171 I
Tet1 Mus musculus ENSMUSG00000047146 I
TET1 Macaca mulatta ENSMMUG00000023198 I
XP_001368961.2 Monodelphis domestica XP_001368961.2 D