Carubv10006189m.g (Capsella rubella)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00319 (SRF-TF) IPR002100 Carubv10006189m.g T257743_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Carubv10006189m MADS box 10 54

Links

Other MADS box family TFs
Other Capsella rubella TFs

14 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aquca_003_00875 Aquilegia coerulea Aquca_003_00875 N
BGIOSGA025747 Oryza indica BGIOSGA025747 N
BGIOSGA031062 Oryza indica BGIOSGA031062 N
BGIOSGA037776 Oryza indica BGIOSGA037776 N
BRADI3G41470 Brachypodium distachyon BRADI3G41470 N
BRADI4G02060 Brachypodium distachyon BRADI4G02060 N
BRADI4G34800 Brachypodium distachyon BRADI4G34800 N
Ca_22941 Cicer arietinum Ca_22941 N
F775_31820 Aegilops tauschii F775_31820 N
GRMZM2G054252 Zea mays GRMZM2G054252 N
GRMZM2G054277 Zea mays GRMZM2G054277 N
GRMZM2G100583 Zea mays GRMZM2G100583 N
GRMZM2G114850 Zea mays GRMZM2G114850 N
GRMZM2G179049 Zea mays GRMZM2G179049 N
LPERR01G22040 Leersia perrieri LPERR01G22040 N
LPERR08G18520 Leersia perrieri LPERR08G18520 N
LPERR09G12100 Leersia perrieri LPERR09G12100 N
LPERR12G15510 Leersia perrieri LPERR12G15510 N
Lus10014342.g Linum usitatissimum Lus10014342.g N
MLOC_55957 Hordeum vulgare MLOC_55957 N
MLOC_64240 Hordeum vulgare MLOC_64240 N
OB09G22520 Oryza brachyantha OB09G22520 N
OB12G25170 Oryza brachyantha OB12G25170 N
OBART09G15890 Oryza barthii OBART09G15890 N
OBART12G18490 Oryza barthii OBART12G18490 N
OGLUM02G04830 Oryza glumaepatula OGLUM02G04830 N
OGLUM07G14740 Oryza glumaepatula OGLUM07G14740 N
OGLUM09G16460 Oryza glumaepatula OGLUM09G16460 N
OGLUM12G20140 Oryza glumaepatula OGLUM12G20140 N
OLONG_012578 Oryza longistaminata OLONG_012578 N
OMERI06G13840 Oryza meridionalis OMERI06G13840 N
OMERI07G09680 Oryza meridionalis OMERI07G09680 N
OMERI07G11790 Oryza meridionalis OMERI07G11790 N
OMERI09G11810 Oryza meridionalis OMERI09G11810 N
OMERI12G13180 Oryza meridionalis OMERI12G13180 N
ONIVA07G09980 Oryza nivara ONIVA07G09980 N
ONIVA07G13650 Oryza nivara ONIVA07G13650 N
ONIVA09G17010 Oryza nivara ONIVA09G17010 N
ONIVA12G17390 Oryza nivara ONIVA12G17390 N
OPUNC09G14320 Oryza punctata OPUNC09G14320 N
OPUNC12G16690 Oryza punctata OPUNC12G16690 N
ORGLA07G0123600 Oryza glaberrima ORGLA07G0123600 N
ORGLA09G0123200 Oryza glaberrima ORGLA09G0123200 N
ORGLA12G0157500 Oryza glaberrima ORGLA12G0157500 N
ORUFI07G15560 Oryza rufipogon ORUFI07G15560 N
ORUFI09G17170 Oryza rufipogon ORUFI09G17170 N
ORUFI12G20640 Oryza rufipogon ORUFI12G20640 N
OS09G0509100 Oryza sativa OS09G0509100 N
OS12G0610600 Oryza sativa OS12G0610600 N
Pavir.Ca02777 Panicum virgatum Pavir.Ca02777 N
Pavir.J04931 Panicum virgatum Pavir.J04931 N
Pavir.J11699 Panicum virgatum Pavir.J11699 N
Pavir.J23083 Panicum virgatum Pavir.J23083 N
Pavir.J24268 Panicum virgatum Pavir.J24268 N
Sb05g008290 Sorghum bicolor Sb05g008290 N
Sb08g021080 Sorghum bicolor Sb08g021080 N
SELMODRAFT_69130 Selaginella moellendorffii SELMODRAFT_69130 N
SELMODRAFT_69131 Selaginella moellendorffii SELMODRAFT_69131 N
Si014408m.g Setaria italica Si014408m.g N
Si022747m.g Setaria italica Si022747m.g N
Si030942m.g Setaria italica Si030942m.g N
Solyc07g066330.2 Solanum lycopersicum Solyc07g066330.2 N
Traes_5AS_E5FD82E36 Triticum aestivum Traes_5AS_E5FD82E36 N
Traes_5BL_456C3408A Triticum aestivum Traes_5BL_456C3408A N
Traes_5BS_9F043AE17 Triticum aestivum Traes_5BS_9F043AE17 N
Traes_5DL_36AE1EF2B Triticum aestivum Traes_5DL_36AE1EF2B N
TRIUR3_03598 Triticum urartu TRIUR3_03598 N