Carubv10027564m.g (Capsella rubella)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00319 (SRF-TF) IPR002100 Carubv10027564m.g T257840_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Carubv10027564m MADS box 10 55

Links

Other MADS box family TFs
Other Capsella rubella TFs

12 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Alligator_sinensis_CCG001547.1 Alligator sinensis Alligator_sinensis_CCG001547.1 N 0.000
ENSAMEG00000000319 Ailuropoda melanoleuca ENSAMEG00000000319 N 0.000
ENSCSAG00000004387 Chlorocebus sabaeus ENSCSAG00000004387 N 0.000
ENSECAG00000007605 Equus caballus ENSECAG00000007605 N 0.000
ENSGACG00000004248 Gasterosteus aculeatus ENSGACG00000004248 N 0.000
ENSLOCG00000004031 Lepisosteus oculatus ENSLOCG00000004031 N 0.000
ENSMEUG00000014580 Macropus eugenii ENSMEUG00000014580 N 0.000
ENSMPUG00000006206 Mustela putorius furo ENSMPUG00000006206 N 0.000
ENSNLEG00000011306 Nomascus leucogenys ENSNLEG00000011306 N 0.000
ENSOARG00000004987 Ovis aries ENSOARG00000004987 N 0.000
ENSP00000398837 Macaca fascicularis ENSP00000398837 N 0.000
ENSP00000398837-D1 Bos grunniens ENSP00000398837-D1 N 0.000
ENSPANG00000007179 Papio anubis ENSPANG00000007179 N 0.000
ENSPFOG00000008123 Poecilia formosa ENSPFOG00000008123 I 0.000
ENSPPYG00000009877 Pongo abelii ENSPPYG00000009877 N 0.000
ENSSSCG00000002895 Sus scrofa ENSSSCG00000002895 N 0.000
ENSSTOG00000027453 Ictidomys tridecemlineatus ENSSTOG00000027453 N 0.000
ENSXMAG00000015008 Xiphophorus maculatus ENSXMAG00000015008 I 0.000
KMT2B Ochotona princeps ENSOPRG00000001336 N 0.000
KMT2B Felis catus ENSFCAG00000006381 N 0.000
KMT2B Procavia capensis ENSPCAG00000004566 N 0.000
KMT2B Pan troglodytes ENSPTRG00000010858 N 0.000
KMT2B Pteropus vampyrus ENSPVAG00000012828 N 0.000
Kmt2b Rattus norvegicus ENSRNOG00000055525 N 0.000
KMT2B Tupaia belangeri ENSTBEG00000007263 N 0.000
KMT2B Tursiops truncatus ENSTTRG00000002243 N 0.000
KMT2B Bos taurus ENSBTAG00000002763 N 0.000
KMT2B Oryctolagus cuniculus ENSOCUG00000012768 N 0.000
Kmt2b Dipodomys ordii ENSDORG00000009061 N 0.000
KMT2B Homo sapiens ENSG00000272333 N 0.000
KMT2B Dasypus novemcinctus ENSDNOG00000005517 N 0.000
KMT2B Gorilla gorilla ENSGGOG00000016796 N 0.000
KMT2B Loxodonta africana ENSLAFG00000018741 N 0.000
KMT2B Cavia porcellus ENSCPOG00000003718 N 0.000
KMT2B Callithrix jacchus ENSCJAG00000010126 I 0.000
KMT2B Microcebus murinus ENSMICG00000009928 N 0.000
KMT2B Myotis lucifugus ENSMLUG00000011406 N 0.000
KMT2B Macaca mulatta ENSMMUG00000002381 N 0.000
KMT2B Monodelphis domestica ENSMODG00000013994 N 0.000
KMT2B Canis familiaris ENSCAFG00000006878 N 0.000
Kmt2b Mus musculus ENSMUSG00000006307 N 0.000
KMT2B Anolis carolinensis ENSACAG00000016679 N 0.000
KMT2B Otolemur garnettii ENSOGAG00000004157 N 0.000
Myotis_brandtii_WBP7_10035154 Myotis brandtii Myotis_brandtii_WBP7_10035154 N 0.000
Ogr13647 Ophisaurus gracilis Ogr13647 N 0.000
Pvit_00563 Pogona vitticeps Pvit_00563 N 0.000