Ciclev10024463m.g (Citrus clementina)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00319 (SRF-TF) IPR002100 Ciclev10024463m.g T257902_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AGL80
M06994_2.00 		Arabidopsis thaliana
TCACCA
TGGTGA		 Dap-seq
OMalley et al.(2016)
FEM111_col_a 		0.804 0.804
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Ciclev10024463m MADS box 10 56

Links

Other MADS box family TFs
Other Citrus clementina TFs

74 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AALB007753 Anopheles albimanus AALB007753 I 0.000
AARA011332 Anopheles arabiensis AARA011332 I 0.000
ACHR007816 Anopheles christyi ACHR007816 I 0.000
ACOM036889 Anopheles coluzzii ACOM036889 N 0.000
ACUA000036 Anopheles culicifacies ACUA000036 I 0.000
AEPI011470 Anopheles epiroticus AEPI011470 I 0.000
AFAF001885 Anopheles farauti AFAF001885 N 0.000
AFUN005474 Anopheles funestus AFUN005474 I 0.000
AQUA008686 Anopheles quadriannulatus AQUA008686 I 0.000
AQUA009447 Anopheles quadriannulatus AQUA009447 N 0.000
ASIS002518 Anopheles sinensis ASIS002518 I 0.000
BGIBMGA008906 Bombyx mori BGIBMGA008906 I 0.000
CPIJ006372 Culex quinquefasciatus CPIJ006372 I 0.000
CPIJ016826 Culex quinquefasciatus CPIJ016826 I 0.000
CpipJ_CPIJ006372 Culex pipiens CpipJ_CPIJ006372 I 0.000
CpipJ_CPIJ016826 Culex pipiens CpipJ_CPIJ016826 I 0.000
ENSTRUG00000017865 Takifugu rubripes ENSTRUG00000017865 I 0.000
MESCA007079 Megaselia scalaris MESCA007079 I 0.000
PPAI005889 Phlebotomus papatasi PPAI005889 I 0.000
Runx1 Mus musculus ENSMUSG00000022952 D 0.000
Runx2 Mus musculus ENSMUSG00000039153 D 0.000
RUNX2 Homo sapiens ENSG00000124813 D 0.000
TC006536 Tribolium castaneum TC006536 I 0.000