CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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evm.TU.contig_37107
(
Carica papaya
)
MADS box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00319 (SRF-TF)
IPR002100
evm.TU.contig_37107
T258103_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
evm.TU.contig_37107.1
MADS box
15
62
KMSNEINLQITFSKRRASLSKKASEWSTLRGVDIAIIIFSPSKKAFSF
Links
Other
MADS box
family TFs
Other
Carica papaya
TFs
71 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
CERSUDRAFT_53511
Ceriporiopsis subvermispora
CERSUDRAFT_53511
N
0.000
gw1.12.560.1
Heterobasidion annosum
gw1.12.560.1
N
0.000
HETIRDRAFT_163823
Heterobasidion irregulare
HETIRDRAFT_163823
N
0.000