evm.TU.supercontig_135.3 (Carica papaya)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00319 (SRF-TF) IPR002100 evm.TU.supercontig_135.3 T258170_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
evm.model.supercontig_135.3 MADS box 1 29

Links

Other MADS box family TFs
Other Carica papaya TFs

11 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BGIOSGA028855 Oryza indica BGIOSGA028855 N
BGIOSGA030928 Oryza indica BGIOSGA030928 N
BRADI3G38360 Brachypodium distachyon BRADI3G38360 N
BRADI4G32470 Brachypodium distachyon BRADI4G32470 N
F775_02130 Aegilops tauschii F775_02130 N
GRMZM2G082630 Zea mays GRMZM2G082630 N
LPERR01G07000 Leersia perrieri LPERR01G07000 I
LPERR08G15030 Leersia perrieri LPERR08G15030 N
mgf022146m Mimulus guttatus mgf022146m N
MLOC_2366 Hordeum vulgare MLOC_2366 N
MLOC_70640 Hordeum vulgare MLOC_70640 N
OB08G25230 Oryza brachyantha OB08G25230 N
OBART09G13210 Oryza barthii OBART09G13210 N
OGLUM08G19000 Oryza glumaepatula OGLUM08G19000 N
OGLUM09G13640 Oryza glumaepatula OGLUM09G13640 N
OMERI06G24090 Oryza meridionalis OMERI06G24090 I
OMERI09G10230 Oryza meridionalis OMERI09G10230 N
ONIVA08G20180 Oryza nivara ONIVA08G20180 N
ONIVA09G13640 Oryza nivara ONIVA09G13640 N
OPUNC08G16020 Oryza punctata OPUNC08G16020 N
OPUNC09G11520 Oryza punctata OPUNC09G11520 I
ORGLA08G0157100 Oryza glaberrima ORGLA08G0157100 N
ORUFI08G20260 Oryza rufipogon ORUFI08G20260 N
OS08G0477900 Oryza sativa OS08G0477900 N
Pavir.Fa00651 Panicum virgatum Pavir.Fa00651 N
Pavir.J25149 Panicum virgatum Pavir.J25149 N
Sb07g023280 Sorghum bicolor Sb07g023280 N
Si014356m.g Setaria italica Si014356m.g N
Traes_2AL_7A37B5232 Triticum aestivum Traes_2AL_7A37B5232 N
Traes_2BL_649181D92 Triticum aestivum Traes_2BL_649181D92 N
Traes_2DL_5F0BD9D6F Triticum aestivum Traes_2DL_5F0BD9D6F N
TRIUR3_09991 Triticum urartu TRIUR3_09991 N