CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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evm.TU.supercontig_348.6
(
Carica papaya
)
MADS box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00319 (SRF-TF)
IPR002100
evm.TU.supercontig_348.6
T258241_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
evm.model.supercontig_348.6
MADS box
20
67
KMENEASLQVTFSKHRSSLFKKASELCTLCRPDVGLIVFSPGNRAFCY
evm.model.supercontig_348.6
MADS box
111
132
EAARKRGKELKQRRKGLMKELW
Links
Other
MADS box
family TFs
Other
Carica papaya
TFs
19 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AGABI2DRAFT_177333
Agaricus bisporus
AGABI2DRAFT_177333
N
CC1G_06391
Coprinopsis cinerea
CC1G_06391
N
CY34DRAFT_78686
Suillus luteus
CY34DRAFT_78686
N
GALMADRAFT_247715
Galerina marginata
GALMADRAFT_247715
N
GYMLUDRAFT_259868
Gymnopus luxurians
GYMLUDRAFT_259868
N
K443DRAFT_118162
Laccaria amethystina
K443DRAFT_118162
N
LACBIDRAFT_297145
Laccaria bicolor
LACBIDRAFT_297145
N
M378DRAFT_163226
Amanita muscaria
M378DRAFT_163226
N
M404DRAFT_74181
Pisolithus tinctorius
M404DRAFT_74181
N
M413DRAFT_446678
Hebeloma cylindrosporum
M413DRAFT_446678
N
Moror_13134
Moniliophthora roreri
Moror_13134
N
PAXINDRAFT_171004
Paxillus involutus
PAXINDRAFT_171004
N
PAXRUDRAFT_827017
Paxillus rubicundulus
PAXRUDRAFT_827017
N
PILCRDRAFT_5926
Piloderma croceum
PILCRDRAFT_5926
N
PISMIDRAFT_110960
Pisolithus microcarpus
PISMIDRAFT_110960
N
PLEOSDRAFT_1113890
Pleurotus ostreatus
PLEOSDRAFT_1113890
N
SCHCODRAFT_257247
Schizophyllum commune
SCHCODRAFT_257247
N
SCLCIDRAFT_1209202
Scleroderma citrinum
SCLCIDRAFT_1209202
N
SCLCIDRAFT_1223514
Scleroderma citrinum
SCLCIDRAFT_1223514
N
SCLCIDRAFT_1225281
Scleroderma citrinum
SCLCIDRAFT_1225281
N