Lus10022325.g (Linum usitatissimum)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00319 (SRF-TF) IPR002100 Lus10022325.g T258584_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Lus10022325 MADS box 5 54

Links

Other MADS box family TFs
Other Linum usitatissimum TFs

12 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aquca_004_00181 Aquilegia coerulea Aquca_004_00181 I
BRADI4G01770 Brachypodium distachyon BRADI4G01770 I
Ca_08043 Cicer arietinum Ca_08043 I
Cla006547 Citrullus lanatus Cla006547 I
Cucsa.298390 Cucumis sativus Cucsa.298390 I
Genemark1.2391_g Coccomyxa subellipsoidea C169 Genemark1.2391_g N
GLYMA09G03390 Glycine max GLYMA09G03390 I
GLYMA15G14320 Glycine max GLYMA15G14320 I
GRMZM2G095239 Zea mays GRMZM2G095239 N
GRMZM2G163291 Zea mays GRMZM2G163291 N
GSMUA_Achr7G01090_001 Musa acuminata GSMUA_Achr7G01090_001 I
LPERR03G22590 Leersia perrieri LPERR03G22590 N
mg015409m Mimulus guttatus mg015409m N
mgf000125m Mimulus guttatus mgf000125m I
mgf004823m Mimulus guttatus mgf004823m I
mgf010975m Mimulus guttatus mgf010975m I
MLOC_10278 Hordeum vulgare MLOC_10278 I
MLOC_34636 Hordeum vulgare MLOC_34636 N
MTR_0095s0040 Medicago truncatula MTR_0095s0040 I
MTR_2g031870 Medicago truncatula MTR_2g031870 I
MTR_8g092810 Medicago truncatula MTR_8g092810 I
MTR_8g494240 Medicago truncatula MTR_8g494240 I
Pavir.Eb00490 Panicum virgatum Pavir.Eb00490 N
Pavir.Ia01166 Panicum virgatum Pavir.Ia01166 N
Pavir.Ib04118 Panicum virgatum Pavir.Ib04118 N
Pavir.J13527 Panicum virgatum Pavir.J13527 N
Pavir.J17249 Panicum virgatum Pavir.J17249 N
PGSC0003DMG400023131 Solanum tuberosum PGSC0003DMG400023131 I
PGSC0003DMG402003328 Solanum tuberosum PGSC0003DMG402003328 I
POPTR_0007s14920 Populus trichocarpa POPTR_0007s14920 I
Sb01g013670 Sorghum bicolor Sb01g013670 N
Sb03g005080 Sorghum bicolor Sb03g005080 N
Si002375m.g Setaria italica Si002375m.g N
Si036471m.g Setaria italica Si036471m.g N
Solyc02g064630.2 Solanum lycopersicum Solyc02g064630.2 I
Solyc11g044320.1 Solanum lycopersicum Solyc11g044320.1 I
Traes_5AL_1FB74A6E1 Triticum aestivum Traes_5AL_1FB74A6E1 N
Traes_5AS_8756ECB5A Triticum aestivum Traes_5AS_8756ECB5A I
Traes_5BL_692FEF87A Triticum aestivum Traes_5BL_692FEF87A N
Traes_5BS_EB206B8BC Triticum aestivum Traes_5BS_EB206B8BC I
Traes_5DL_1C6A8C773 Triticum aestivum Traes_5DL_1C6A8C773 N
Traes_5DS_3EE830A43 Triticum aestivum Traes_5DS_3EE830A43 I
TRIUR3_10613 Triticum urartu TRIUR3_10613 I
TRIUR3_26840 Triticum urartu TRIUR3_26840 N
VIT_00s1311g00020 Vitis vinifera VIT_00s1311g00020 I
VIT_07s0151g00480 Vitis vinifera VIT_07s0151g00480 I