MDP0000726295 (Malus domestica)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00319 (SRF-TF) IPR002100 MDP0000726295 T258772_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AGL80
M06994_2.00 		Arabidopsis thaliana
TCACCA
TGGTGA		 Dap-seq
OMalley et al.(2016)
FEM111_col_a 		0.741 0.741
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
MDP0000726295 MADS box 1 28

Links

Other MADS box family TFs
Other Malus domestica TFs

13 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
12664_YJR127C Saccharomyces mikatae 12664_YJR127C I 0.000
12764_Multiple Saccharomyces paradoxus 12764_Multiple I 0.000
13784_YJR127C Saccharomyces bayanus 13784_YJR127C I 0.000
16099_Multiple Saccharomyces mikatae 16099_Multiple I 0.000
17638_YML081W Saccharomyces paradoxus 17638_YML081W I 0.000
18114_YML081W Saccharomyces bayanus 18114_YML081W I 0.000
AACERI_AaceriAER159C Saccharomycetaceae sp ashbya aceri AACERI_AaceriAER159C I 0.000
AGOS_AER159C Ashbya gossypii AGOS_AER159C I 0.000
CAGL0H04213g Candida glabrata CAGL0H04213g I 0.000
CAGL0M00594g Candida glabrata CAGL0M00594g I 0.000
KAFR_0B06810 Kazachstania africana KAFR_0B06810 I 0.000
KAFR_0E04270 Kazachstania africana KAFR_0E04270 I 0.000
KLLA0_B04477g Kluyveromyces lactis KLLA0_B04477g I 0.000
KLTH0D18062g Lachancea thermotolerans KLTH0D18062g I 0.000
KLTH0D18062g Kluyveromyces thermotolerans KLTH0D18062g I 0.000
Kwal_16621 Kluyveromyces waltii Kwal_16621 I 0.000
NCAS_0A06250 Naumovozyma castellii NCAS_0A06250 I 0.000
NDAI_0D03240 Naumovozyma dairenensis NDAI_0D03240 I 0.000
NDAI_0J02850 Naumovozyma dairenensis NDAI_0J02850 I 0.000
RSF2 Saccharomyces cerevisiae YJR127C D 0.000
SAKL0G18062g Lachancea kluyveri SAKL0G18062g I 0.000
Scas_Contig703.23 Saccharomyces castellii Scas_Contig703.23 I 0.000
SKUD_162303 Saccharomyces kudriavzevii SKUD_162303 I 0.000
SU7_2441 Saccharomyces arboricola SU7_2441 I 0.000
TBLA_0B06160 Tetrapisispora blattae TBLA_0B06160 I 0.000
TBLA_0E04770 Tetrapisispora blattae TBLA_0E04770 I 0.000
TDA9 Saccharomyces cerevisiae YML081W D 0.000
TDEL_0D00670 Torulaspora delbrueckii TDEL_0D00670 I 0.000
TPHA_0B00380 Tetrapisispora phaffii TPHA_0B00380 I 0.000
ZBAI_03167 Zygosaccharomyces bailii ZBAI_03167 I 0.000
ZBAI_03168 Zygosaccharomyces bailii ZBAI_03168 I 0.000
ZBAI_08875 Zygosaccharomyces bailii ZBAI_08875 I 0.000
ZYRO0B14894g Zygosaccharomyces rouxii ZYRO0B14894g I 0.000