CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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orange1.1g032052m.g
(
Citrus sinensis
)
MADS box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00319 (SRF-TF)
IPR002100
orange1.1g032052m.g
T258802_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
orange1.1g032052m
MADS box
1
40
MVTFSKRRQGLFKKAQEYANITGSQIAVLVFSPAGNPYVH
Links
Other
MADS box
family TFs
Other
Citrus sinensis
TFs
4 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Ciclev10010485m.g
Citrus clementina
Ciclev10010485m.g
N
0.744
Ciclev10022548m.g
Citrus clementina
Ciclev10022548m.g
N
0.833
Ciclev10024318m.g
Citrus clementina
Ciclev10024318m.g
N
0.833
Ciclev10024340m.g
Citrus clementina
Ciclev10024340m.g
N
0.975