Thhalv10002349m.g (Eutrema salsugineum)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00319 (SRF-TF) IPR002100 Thhalv10002349m.g T259096_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AGL80
M06994_2.00 		Arabidopsis thaliana
TCACCA
TGGTGA		 Dap-seq
OMalley et al.(2016)
FEM111_col_a 		0.702 0.702
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Thhalv10002349m MADS box 10 57

Links

Other MADS box family TFs
Other Eutrema salsugineum TFs

27 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BBA_05630 Beauveria bassiana BBA_05630 N 0.000
CCM_04623 Cordyceps militaris CCM_04623 N 0.000
CFIO01_08239 Colletotrichum fioriniae CFIO01_08239 N 0.000
CGGC5_5177 Colletotrichum gloeosporioides CGGC5_5177 N 0.000
CH063_01997 Colletotrichum higginsianum CH063_01997 N 0.000
CSUB01_01955 Colletotrichum sublineola CSUB01_01955 N 0.000
e_gw1.2.1437.1 Nectria haematococca e_gw1.2.1437.1 N 0.000
FFUJ_06104 Fusarium fujikuroi FFUJ_06104 N 0.000
FOXG_03196 Fusarium oxysporum FOXG_03196 N 0.000
FPSE_09014 Fusarium pseudograminearum FPSE_09014 N 0.000
FVEG_02065 Fusarium verticillioides FVEG_02065 N 0.000
GLRG_05399 Colletotrichum graminicola GLRG_05399 N 0.000
NechaG35170 Fusarium solani NechaG35170 N 0.000
OCS_03494 Ophiocordyceps sinensis OCS_03494 N 0.000
S40285_07596 Stachybotrys chlorohalonata S40285_07596 N 0.000
S40288_03002 Stachybotrys chartarum S40288_03002 N 0.000
TRIATDRAFT_284947 Trichoderma atroviride TRIATDRAFT_284947 N 0.000
TRIREDRAFT_79673 Trichoderma reesei TRIREDRAFT_79673 N 0.000
VHEMI06839 Torrubiella hemipterigena VHEMI06839 N 0.000