Thhalv10015500m.g (Eutrema salsugineum)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00319 (SRF-TF) IPR002100 Thhalv10015500m.g T259136_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Thhalv10015500m MADS box 12 58

Links

Other MADS box family TFs
Other Eutrema salsugineum TFs

10 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aan_R008261 Calypte anna Aan_R008261 I
ACYPI000143 Acyrthosiphon pisum ACYPI000143 I
Afo_R009018 Aptenodytes forsteri Afo_R009018 I
Alligator_sinensis_CCG002049.1 Alligator sinensis Alligator_sinensis_CCG002049.1 I
Alligator_sinensis_CCG008096.1 Alligator sinensis Alligator_sinensis_CCG008096.1 I
Alligator_sinensis_CCG014169.1 Alligator sinensis Alligator_sinensis_CCG014169.1 N
BAH04511 Xenopus tropicalis BAH04511 I
BAH04512 Xenopus tropicalis BAH04512 I
Bm3498 Brugia malayi Bm3498 I
Brh_R011905 Buceros rhinoceros Brh_R011905 I
CapteG110717 Capitella teleta CapteG110717 I
CGI_10005914 Crassostrea gigas CGI_10005914 I
CGI_10016324 Crassostrea gigas CGI_10016324 I
Cmyd_10005826 Chelonia mydas Cmyd_10005826 I
Cmyd_10018097 Chelonia mydas Cmyd_10018097 I
csin107221 Clonorchis sinensis csin107221 I
D917_09589 Trichinella nativa D917_09589 I
D918_00588 Trichuris suis D918_00588 I
EFV62265 Trichinella spiralis EFV62265 I
ENSAMEG00000001112 Ailuropoda melanoleuca ENSAMEG00000001112 I
ENSAMEG00000008802 Ailuropoda melanoleuca ENSAMEG00000008802 I
ENSAMXG00000001195 Astyanax mexicanus ENSAMXG00000001195 I
ENSAMXG00000009196 Astyanax mexicanus ENSAMXG00000009196 I
ENSAMXG00000009197 Astyanax mexicanus ENSAMXG00000009197 I
ENSAPLG00000006398 Anas platyrhynchos ENSAPLG00000006398 I
ENSAPLG00000008848 Anas platyrhynchos ENSAPLG00000008848 I
ENSBTAP00000015125-D1 Bos grunniens ENSBTAP00000015125-D1 I
ENSCPOG00000001044 Cavia porcellus ENSCPOG00000001044 I
ENSCSAG00000002347 Chlorocebus sabaeus ENSCSAG00000002347 I
ENSCSAG00000014936 Chlorocebus sabaeus ENSCSAG00000014936 I
ENSFALG00000005474 Ficedula albicollis ENSFALG00000005474 I
ENSFALG00000007252 Ficedula albicollis ENSFALG00000007252 I
ENSFALG00000007778 Ficedula albicollis ENSFALG00000007778 I
ENSGALG00000012151 Gallus gallus ENSGALG00000012151 I
ENSGMOG00000009107 Gadus morhua ENSGMOG00000009107 I
ENSGMOG00000011728 Gadus morhua ENSGMOG00000011728 I
ENSGMOG00000011740 Gadus morhua ENSGMOG00000011740 I
ENSLACG00000002339 Latimeria chalumnae ENSLACG00000002339 I
ENSLACG00000012884 Latimeria chalumnae ENSLACG00000012884 I
ENSLACG00000014713 Latimeria chalumnae ENSLACG00000014713 I
ENSLOCG00000006550 Lepisosteus oculatus ENSLOCG00000006550 I
ENSLOCG00000007616 Lepisosteus oculatus ENSLOCG00000007616 I
ENSMICG00000008299 Microcebus murinus ENSMICG00000008299 I
ENSMPUG00000002715 Mustela putorius furo ENSMPUG00000002715 I
ENSMPUG00000007865 Mustela putorius furo ENSMPUG00000007865 I
ENSMPUG00000015166 Mustela putorius furo ENSMPUG00000015166 I
ENSNLEG00000000427 Nomascus leucogenys ENSNLEG00000000427 I
ENSNLEG00000001606 Nomascus leucogenys ENSNLEG00000001606 I
ENSOANG00000006968 Ornithorhynchus anatinus ENSOANG00000006968 I
ENSOARG00000006614 Ovis aries ENSOARG00000006614 I
ENSONIG00000000187 Oreochromis niloticus ENSONIG00000000187 I
ENSONIG00000001919 Oreochromis niloticus ENSONIG00000001919 I
ENSONIG00000003732 Oreochromis niloticus ENSONIG00000003732 I
ENSONIG00000011030 Oreochromis niloticus ENSONIG00000011030 I
ENSONIG00000013614 Oreochromis niloticus ENSONIG00000013614 I
ENSP00000377435 Macaca fascicularis ENSP00000377435 I
ENSP00000377435-D1 Bos grunniens ENSP00000377435-D1 I
ENSP00000384152 Macaca fascicularis ENSP00000384152 I
ENSP00000386170 Macaca fascicularis ENSP00000386170 I
ENSPANG00000007074 Papio anubis ENSPANG00000007074 I
ENSPANG00000016891 Papio anubis ENSPANG00000016891 I
ENSPANG00000022155 Papio anubis ENSPANG00000022155 I
ENSPFOG00000016001 Poecilia formosa ENSPFOG00000016001 I
ENSPFOG00000017869 Poecilia formosa ENSPFOG00000017869 I
ENSPFOG00000019824 Poecilia formosa ENSPFOG00000019824 I
ENSPFOG00000024759 Poecilia formosa ENSPFOG00000024759 I
ENSPPYG00000004994 Pongo abelii ENSPPYG00000004994 I
ENSPPYG00000008800 Pongo abelii ENSPPYG00000008800 I
ENSPPYG00000017641 Pongo abelii ENSPPYG00000017641 I
ENSPSIG00000016149 Pelodiscus sinensis ENSPSIG00000016149 I
ENSSHAG00000012638 Sarcophilus harrisii ENSSHAG00000012638 I
ENSSHAG00000016356 Sarcophilus harrisii ENSSHAG00000016356 I
ENSSTOG00000009394 Ictidomys tridecemlineatus ENSSTOG00000009394 I
ENSXMAG00000005348 Xiphophorus maculatus ENSXMAG00000005348 I
ENSXMAG00000005372 Xiphophorus maculatus ENSXMAG00000005372 I
ENSXMAG00000008530 Xiphophorus maculatus ENSXMAG00000008530 I
estExt_fgenesh2_pg.C_1570024 Branchiostoma floridae estExt_fgenesh2_pg.C_1570024 D
estExt_fgenesh2_pg.C_1570035 Branchiostoma floridae estExt_fgenesh2_pg.C_1570035 I
fgenesh2_pg.scaffold_89000016 Branchiostoma floridae fgenesh2_pg.scaffold_89000016 I
Gfo_R008747 Geospiza fortis Gfo_R008747 I
Gfo_R010838 Geospiza fortis Gfo_R010838 I
HelroG63904 Helobdella robusta HelroG63904 I
HelroG71638 Helobdella robusta HelroG71638 I
HNAJ_0001193901 Hymenolepis nana HNAJ_0001193901 I
LotgiG117236 Lottia gigantea LotgiG117236 I
ML45844a Mnemiopsis leidyi ML45844a I
Myotis_brandtii_Tbx20_10020109 Myotis brandtii Myotis_brandtii_Tbx20_10020109 I
Myotis_brandtii_TBX5_10028219 Myotis brandtii Myotis_brandtii_TBX5_10028219 I
Ocbimv22029974m.g Octopus bimaculoides Ocbimv22029974m.g I
Ogr05323 Ophisaurus gracilis Ogr05323 I
Pvit_04171 Pogona vitticeps Pvit_04171 I
Smp_145230 Schistosoma mansoni Smp_145230 I
T265_05725 Opisthorchis viverrini T265_05725 I
Tal_R011807 Tyto alba Tal_R011807 I
tbx16 Danio rerio ENSDARG00000007329 I
tbx16 Gasterosteus aculeatus ENSGACG00000012454 I
tbx16 Tetraodon nigroviridis ENSTNIG00000011487 N
tbx16 Takifugu rubripes ENSTRUG00000016468 I
TBX2 Taeniopygia guttata ENSTGUG00000007813 I
tbx2.L Xenopus laevis XB-GENE-1018122 I
tbx2.S Xenopus laevis XB-GENE-6255176 I
TBX20 Anolis carolinensis ENSACAG00000007473 I
TBX20 Canis familiaris ENSCAFG00000028536 I
TBX20 Callithrix jacchus ENSCJAG00000012232 I
TBX20 Cavia porcellus ENSCPOG00000015229 I
TBX20 Dasypus novemcinctus ENSDNOG00000004142 I
TBX20 Equus caballus ENSECAG00000018182 I
TBX20 Erinaceus europaeus ENSEEUG00000010135 I
TBX20 Echinops telfairi ENSETEG00000012771 I
TBX20 Felis catus ENSFCAG00000013004 I
TBX20 Homo sapiens ENSG00000164532 D
TBX20 Gorilla gorilla ENSGGOG00000026618 I
TBX20 Loxodonta africana ENSLAFG00000012790 I
TBX20 Meleagris gallopavo ENSMGAG00000012040 I
TBX20 Myotis lucifugus ENSMLUG00000015517 I
TBX20 Macaca mulatta ENSMMUG00000012549 I
TBX20 Monodelphis domestica ENSMODG00000000085 I
Tbx20 Mus musculus ENSMUSG00000031965 D
TBX20 Oryctolagus cuniculus ENSOCUG00000007422 I
TBX20 Otolemur garnettii ENSOGAG00000010338 I
TBX20 Ochotona princeps ENSOPRG00000013626 I
TBX20 Pan troglodytes ENSPTRG00000019076 I
Tbx20 Rattus norvegicus ENSRNOG00000016181 I
TBX20 Taeniopygia guttata ENSTGUG00000005375 I
tbx2b Oryzias latipes ENSORLG00000010011 I
tbx2b Tetraodon nigroviridis ENSTNIG00000010765 I
TBX3 Monodelphis domestica ENSMODG00000012059 I
tbx3a Danio rerio ENSDARG00000002216 I
tbx3a Gasterosteus aculeatus ENSGACG00000016783 I
tbx3a Oryzias latipes ENSORLG00000007316 I
tbx3a Tetraodon nigroviridis ENSTNIG00000009035 I
tbx3a Takifugu rubripes ENSTRUG00000015097 I
TBX4 Bos taurus ENSBTAG00000009968 I
TBX4 Canis familiaris ENSCAFG00000017740 I
TBX4 Callithrix jacchus ENSCJAG00000001281 I
TBX4 Dasypus novemcinctus ENSDNOG00000035197 I
TBX4 Equus caballus ENSECAG00000024414 I
TBX4 Erinaceus europaeus ENSEEUG00000009722 I
TBX4 Felis catus ENSFCAG00000026664 I
TBX4 Homo sapiens ENSG00000121075 D
TBX4 Gorilla gorilla ENSGGOG00000013904 I
TBX4 Loxodonta africana ENSLAFG00000006608 I
TBX4 Meleagris gallopavo ENSMGAG00000007617 I
TBX4 Microcebus murinus ENSMICG00000016673 I
TBX4 Myotis lucifugus ENSMLUG00000011682 I
TBX4 Macaca mulatta ENSMMUG00000022580 I
Tbx4 Mus musculus ENSMUSG00000000094 D
TBX4 Ornithorhynchus anatinus ENSOANG00000011525 I
TBX4 Oryctolagus cuniculus ENSOCUG00000010834 I
TBX4 Otolemur garnettii ENSOGAG00000007474 I
TBX4 Ochotona princeps ENSOPRG00000012257 I
TBX4 Pan troglodytes ENSPTRG00000009491 I
TBX4 Pteropus vampyrus ENSPVAG00000016866 I
Tbx4 Rattus norvegicus ENSRNOG00000003544 I
TBX4 Sus scrofa ENSSSCG00000022980 I
TBX4 Tursiops truncatus ENSTTRG00000004552 I
TBX5 Bos taurus ENSBTAG00000011384 I
TBX5 Canis familiaris ENSCAFG00000009189 I
TBX5 Callithrix jacchus ENSCJAG00000009744 I
TBX5 Cavia porcellus ENSCPOG00000014558 I
TBX5 Dasypus novemcinctus ENSDNOG00000025303 I
TBX5 Equus caballus ENSECAG00000017114 I
TBX5 Felis catus ENSFCAG00000005574 I
TBX5 Homo sapiens ENSG00000089225 D
TBX5 Gallus gallus ENSGALG00000008253 I
TBX5 Gorilla gorilla ENSGGOG00000013775 I
TBX5 Loxodonta africana ENSLAFG00000010125 I
TBX5 Meleagris gallopavo ENSMGAG00000010075 I
TBX5 Myotis lucifugus ENSMLUG00000016530 I
TBX5 Macaca mulatta ENSMMUG00000016202 I
TBX5 Monodelphis domestica ENSMODG00000012045 I
Tbx5 Mus musculus ENSMUSG00000018263 D
TBX5 Oryctolagus cuniculus ENSOCUG00000012715 I
TBX5 Otolemur garnettii ENSOGAG00000016204 I
tbx5 Oryzias latipes ENSORLG00000008185 I
TBX5 Pan troglodytes ENSPTRG00000005496 I
Tbx5 Rattus norvegicus ENSRNOG00000001399 I
TBX5 Sus scrofa ENSSSCG00000009867 I
TBX5 Tursiops truncatus ENSTTRG00000000980 I
tbx5 Xenopus tropicalis XB-GENE-486855 I
tbx5.L Xenopus laevis XB-GENE-865653 I
tbx5a Danio rerio ENSDARG00000024894 I
tbx5a Gasterosteus aculeatus ENSGACG00000016787 I
tbx5a Oryzias latipes ENSORLG00000007339 I
tbx5a Tetraodon nigroviridis ENSTNIG00000009036 I
tbx5a Takifugu rubripes ENSTRUG00000015054 I
tbx5b Gasterosteus aculeatus ENSGACG00000009550 I
tbx5b Tetraodon nigroviridis ENSTNIG00000015908 I
TBX6 Gallus gallus ENSGALG00000006374 I
TBX6 Meleagris gallopavo ENSMGAG00000007663 I
TBX6 Taeniopygia guttata ENSTGUG00000010188 I
tetur33g01070 Tetranychus urticae tetur33g01070 I
TMUE_s0121001900 Trichuris muris TMUE_s0121001900 I
TTRE_0000604401 Trichuris trichiura TTRE_0000604401 I
vegt Xenopus tropicalis XB-GENE-1033829 I
vegt.L Xenopus laevis XB-GENE-6252142 N
vegt.S Xenopus laevis XB-GENE-1033836 N
WBGene00245873 Onchocerca volvulus WBGene00245873 I