CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
Thhalv10029256m.g
(
Eutrema salsugineum
)
MADS box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00319 (SRF-TF)
IPR002100
Thhalv10029256m.g
T259205_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Thhalv10029256m
MADS box
15
66
KITKKESLATAFSKRSYGLFSKASQLCLLSDAQIAVLATPPSSNSNVSFFSF
Links
Other
MADS box
family TFs
Other
Eutrema salsugineum
TFs
20 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
DACRYDRAFT_21034
Dacryopinax sp
DACRYDRAFT_21034
N
FOMPIDRAFT_1133696
Fomitopsis pinicola
FOMPIDRAFT_1133696
N
J056_003711
Wallemia ichthyophaga
J056_003711
N
JAAARDRAFT_42073
Jaapia argillacea
JAAARDRAFT_42073
N
M378DRAFT_113194
Amanita muscaria
M378DRAFT_113194
N
M404DRAFT_145665
Pisolithus tinctorius
M404DRAFT_145665
N
Moror_5596
Moniliophthora roreri
Moror_5596
N
PaG_02087
Pseudozyma aphidis
PaG_02087
N
PFL1_06181
Pseudozyma flocculosa
PFL1_06181
N
PHSY_000928
Pseudozyma hubeiensis
PHSY_000928
N
PILCRDRAFT_814340
Piloderma croceum
PILCRDRAFT_814340
N
PLEOSDRAFT_168663
Pleurotus ostreatus
PLEOSDRAFT_168663
N
PSEUBRA_SCAF3g03962
Pseudozyma brasiliensis
PSEUBRA_SCAF3g03962
N
RHTO_06131
Rhodosporidium toruloides
RHTO_06131
N
SCHCODRAFT_233850
Schizophyllum commune
SCHCODRAFT_233850
N
sr11805
Sporisorium reilianum
sr11805
N
UHOR_00811
Ustilago hordei
UHOR_00811
N
UM00528
Ustilago maydis
UM00528
N
UM04099
Ustilago maydis
UM04099
N
V565_012220
Rhizoctonia solani
V565_012220
N
WALSEDRAFT_60515
Wallemia sebi
WALSEDRAFT_60515
N