LjSGA_102554.1 (Lotus japonicus)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00319 (SRF-TF) IPR002100 LjSGA_102554.1 T259399_2.00 Superfamily (2010-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AGL80
M06994_2.00 		Arabidopsis thaliana
TCACCA
TGGTGA		 Dap-seq
OMalley et al.(2016)
FEM111_col_a 		0.707 0.707
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
LjSGA_102554.1 MADS box 10 54

Links

Other MADS box family TFs
Other Lotus japonicus TFs

9 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AAEL006160 Aedes aegypti AAEL006160 I
AAEL006167 Aedes aegypti AAEL006167 I
AAEL007040 Aedes aegypti AAEL007040 I
AALB007752 Anopheles albimanus AALB007752 I
AALB007753 Anopheles albimanus AALB007753 I
AALB007754 Anopheles albimanus AALB007754 I
AALB009220 Anopheles albimanus AALB009220 I
Aan_R007315 Calypte anna Aan_R007315 I
AARA004356 Anopheles arabiensis AARA004356 I
AARA011332 Anopheles arabiensis AARA011332 I
AARA011472 Anopheles arabiensis AARA011472 I
AATE002063 Anopheles atroparvus AATE002063 I
AATE017340 Anopheles atroparvus AATE017340 I
ACEP16400 Atta cephalotes ACEP16400 I
ACEP16410 Atta cephalotes ACEP16410 I
ACHR004078 Anopheles christyi ACHR004078 I
ACHR006341 Anopheles christyi ACHR006341 I
ACOM031089 Anopheles coluzzii ACOM031089 I
ACUA016618 Anopheles culicifacies ACUA016618 I
ACYPI001442 Acyrthosiphon pisum ACYPI001442 I
ACYPI006937 Acyrthosiphon pisum ACYPI006937 I
ACYPI007541 Acyrthosiphon pisum ACYPI007541 I
ADIR005600 Anopheles dirus ADIR005600 I
AEPI003479 Anopheles epiroticus AEPI003479 I
AEPI010884 Anopheles epiroticus AEPI010884 I
AFAF000166 Anopheles farauti AFAF000166 I
Afo_R004888 Aptenodytes forsteri Afo_R004888 I
Afo_R008955 Aptenodytes forsteri Afo_R008955 I
AGAP001094 Anopheles gambiae AGAP001094 I
AGAP002506 Anopheles gambiae AGAP002506 I
AMAM011616 Anopheles maculatus AMAM011616 I
AMAM016300 Anopheles maculatus AMAM016300 I
AMEC007551 Anopheles melas AMEC007551 I
AMEM004753 Anopheles merus AMEM004753 I
AMEM017856 Anopheles merus AMEM017856 I
AMIN002518 Anopheles minimus AMIN002518 I
AMIN005759 Anopheles minimus AMIN005759 I
AQUA008686 Anopheles quadriannulatus AQUA008686 I
AQUA009970 Anopheles quadriannulatus AQUA009970 I
ASIS001308 Anopheles sinensis ASIS001308 I
ASIS002518 Anopheles sinensis ASIS002518 I
ASTEI07770 Anopheles stephensi ASTEI07770 I
ASTEI07771 Anopheles stephensi ASTEI07771 I
ASTEI07959 Anopheles stephensi ASTEI07959 I
BGIBMGA008906 Bombyx mori BGIBMGA008906 I
Brh_R000794 Buceros rhinoceros Brh_R000794 I
Brh_R001637 Buceros rhinoceros Brh_R001637 I
Cflo_03909--XP_394016.2_APIME Camponotus floridanus Cflo_03909--XP_394016.2_APIME I
Cflo_03910--XP_001121886.1_APIME Camponotus floridanus Cflo_03910--XP_001121886.1_APIME I
Cflo_03911--XP_394014.2_APIME Camponotus floridanus Cflo_03911--XP_394014.2_APIME I
Cflo_03913--XP_394013.3_APIME Camponotus floridanus Cflo_03913--XP_394013.3_APIME I
CGI_10005366 Crassostrea gigas CGI_10005366 I
CLEC011122 Cimex lectularius CLEC011122 I
Cmyd_10021516 Chelonia mydas Cmyd_10021516 I
CPIJ001309 Culex quinquefasciatus CPIJ001309 I
CPIJ006372 Culex quinquefasciatus CPIJ006372 I
CPIJ016826 Culex quinquefasciatus CPIJ016826 I
CpipJ_CPIJ001309 Culex pipiens CpipJ_CPIJ001309 I
CpipJ_CPIJ006372 Culex pipiens CpipJ_CPIJ006372 I
CpipJ_CPIJ016826 Culex pipiens CpipJ_CPIJ016826 I
DAPPUDRAFT_290554 Daphnia pulex DAPPUDRAFT_290554 I
DAPPUDRAFT_290555 Daphnia pulex DAPPUDRAFT_290555 I
DAPPUDRAFT_290557 Daphnia pulex DAPPUDRAFT_290557 I
ENSAMEG00000005325 Ailuropoda melanoleuca ENSAMEG00000005325 I
ENSAMXG00000000881 Astyanax mexicanus ENSAMXG00000000881 I
ENSAMXG00000004048 Astyanax mexicanus ENSAMXG00000004048 I
ENSAMXG00000012244 Astyanax mexicanus ENSAMXG00000012244 I
ENSAPLG00000011653 Anas platyrhynchos ENSAPLG00000011653 I
ENSCING00000002253 Ciona intestinalis ENSCING00000002253 I
ENSCPOG00000002684 Cavia porcellus ENSCPOG00000002684 I
ENSCSAG00000008703 Chlorocebus sabaeus ENSCSAG00000008703 I
ENSFALG00000000025 Ficedula albicollis ENSFALG00000000025 I
ENSFCAG00000029032 Felis catus ENSFCAG00000029032 I
ENSGMOG00000019132 Gadus morhua ENSGMOG00000019132 I
ENSLACG00000013776 Latimeria chalumnae ENSLACG00000013776 I
ENSLACG00000015930 Latimeria chalumnae ENSLACG00000015930 I
ENSLOCG00000002744 Lepisosteus oculatus ENSLOCG00000002744 I
ENSLOCG00000010990 Lepisosteus oculatus ENSLOCG00000010990 I
ENSMPUG00000001340 Mustela putorius furo ENSMPUG00000001340 I
ENSNLEG00000004310 Nomascus leucogenys ENSNLEG00000004310 I
ENSOANG00000031074 Ornithorhynchus anatinus ENSOANG00000031074 I
ENSONIG00000004914 Oreochromis niloticus ENSONIG00000004914 I
ENSONIG00000008210 Oreochromis niloticus ENSONIG00000008210 I
ENSOPRG00000000765 Ochotona princeps ENSOPRG00000000765 I
ENSP00000409227-D1 Bos grunniens ENSP00000409227-D1 I
ENSPANG00000007357 Papio anubis ENSPANG00000007357 I
ENSPFOG00000003997 Poecilia formosa ENSPFOG00000003997 I
ENSPPYG00000011394 Pongo abelii ENSPPYG00000011394 I
ENSPSIG00000014293 Pelodiscus sinensis ENSPSIG00000014293 I
ENSPSIG00000017547 Pelodiscus sinensis ENSPSIG00000017547 I
ENSSHAG00000014782 Sarcophilus harrisii ENSSHAG00000014782 I
ENSSSCG00000012051 Sus scrofa ENSSSCG00000012051 I
ENSSSCG00000025551 Sus scrofa ENSSSCG00000025551 I
ENSTSYG00000005097 Tarsius syrichta ENSTSYG00000005097 I
ENSXMAG00000018835 Xiphophorus maculatus ENSXMAG00000018835 I
GA13742 Drosophila pseudoobscura FBgn0073778 I
GA22609 Drosophila pseudoobscura FBgn0244012 I
GA25684 Drosophila pseudoobscura FBgn0247061 I
GB52718 Apis mellifera GB52718 I
GB52719 Apis mellifera GB52719 I
GB52721 Apis mellifera GB52721 I
GB52761 Apis mellifera GB52761 I
GD17495 Drosophila simulans FBgn0189047 I
GE15340 Drosophila yakuba FBgn0232921 I
GE17788 Drosophila yakuba FBgn0235232 I
GE17890 Drosophila yakuba FBgn0235328 I
GF15967 Drosophila ananassae FBgn0092990 I
GF15970 Drosophila ananassae FBgn0092993 I
GF15983 Drosophila ananassae FBgn0093006 I
Gfo_R015914 Geospiza fortis Gfo_R015914 I
GG17578 Drosophila erecta FBgn0109803 I
GG18309 Drosophila erecta FBgn0110525 I
GG19691 Drosophila erecta FBgn0111893 I
GH17737 Drosophila grimshawi FBgn0125207 I
GH17740 Drosophila grimshawi FBgn0125210 I
GH17774 Drosophila grimshawi FBgn0125244 I
GI14398 Drosophila mojavensis FBgn0137150 I
GI15119 Drosophila mojavensis FBgn0137869 I
GI15484 Drosophila mojavensis FBgn0138233 I
GI15491 Drosophila mojavensis FBgn0138240 I
GJ18742 Drosophila virilis FBgn0205894 I
GJ18917 Drosophila virilis FBgn0206063 I
GJ19245 Drosophila virilis FBgn0206390 I
GK19810 Drosophila willistoni FBgn0221808 I
GK19815 Drosophila willistoni FBgn0221813 I
GK20052 Drosophila willistoni FBgn0222049 I
GK25373 Drosophila willistoni FBgn0227332 I
GL15800 Drosophila persimilis FBgn0153404 I
GL15806 Drosophila persimilis FBgn0153410 I
GL15927 Drosophila persimilis FBgn0153531 I
GL16499 Drosophila persimilis FBgn0154103 I
GM22478 Drosophila sechellia FBgn0177348 I
GM22662 Drosophila sechellia FBgn0177532 I
GM23044 Drosophila sechellia FBgn0177912 I
GM23050 Drosophila sechellia FBgn0177918 I
HMEL009843 Heliconius melpomene HMEL009843 I
Hsal_04635--XP_394013.3_APIME Harpegnathos saltator Hsal_04635--XP_394013.3_APIME I
Hsal_12319--XP_394016.2_APIME Harpegnathos saltator Hsal_12319--XP_394016.2_APIME I
Hsal_12321--XP_001121886.1_APIME Harpegnathos saltator Hsal_12321--XP_001121886.1_APIME I
Hsal_12322--XP_394014.2_APIME Harpegnathos saltator Hsal_12322--XP_394014.2_APIME I
ISCW004493 Ixodes scapularis ISCW004493 I
KGM_21067 Danaus plexippus KGM_21067 I
KGM_21075 Danaus plexippus KGM_21075 I
L798_10922 Zootermopsis nevadensis L798_10922 I
LCUP002652 Lucilia cuprina LCUP002652 I
LCUP002653 Lucilia cuprina LCUP002653 N
LCUP002659 Lucilia cuprina LCUP002659 I
LDEC006645 Leptinotarsa decemlineata LDEC006645 I
LDEC006650 Leptinotarsa decemlineata LDEC006650 I
LLOJ002717 Lutzomyia longipalpis LLOJ002717 I
LotgiG96224 Lottia gigantea LotgiG96224 I
lz Drosophila melanogaster FBgn0002576 D
MCINX000302 Melitaea cinxia MCINX000302 I
MCINX005905 Melitaea cinxia MCINX005905 I
MCINX005906 Melitaea cinxia MCINX005906 I
MDOA009046 Musca domestica MDOA009046 I
MDOA011942 Musca domestica MDOA011942 I
MDOA013149 Musca domestica MDOA013149 I
MESCA003521 Megaselia scalaris MESCA003521 I
MESCA007078 Megaselia scalaris MESCA007078 I
MESCA007079 Megaselia scalaris MESCA007079 I
NEMVEDRAFT_v1g129231 Nematostella vectensis NEMVEDRAFT_v1g129231 I
NV10998 Nasonia vitripennis NV10998 I
NV11000 Nasonia vitripennis NV11000 I
NV17759 Nasonia vitripennis NV17759 I
NV17793 Nasonia vitripennis NV17793 I
Ogr17914 Ophisaurus gracilis Ogr17914 I
PHUM333300 Pediculus humanus PHUM333300 I
PHUM333310 Pediculus humanus PHUM333310 I
PHUM333320 Pediculus humanus PHUM333320 I
PHUM333340 Pediculus humanus PHUM333340 I
PPAI006591 Phlebotomus papatasi PPAI006591 I
PPAI010986 Phlebotomus papatasi PPAI010986 I
Pvit_04762 Pogona vitticeps Pvit_04762 I
RPRC000026 Rhodnius prolixus RPRC000026 I
RPRC005391 Rhodnius prolixus RPRC005391 I
run Drosophila melanogaster FBgn0003300 D
run Drosophila pseudoobscura FBgn0013862 I
run Drosophila virilis FBgn0013920 I
run Drosophila simulans FBgn0016352 I
run Drosophila yakuba FBgn0084618 I
run Drosophila erecta FBgn0085118 I
RUNX1 Bos taurus ENSBTAG00000004742 I
RUNX1 Canis familiaris ENSCAFG00000009596 I
RUNX1 Callithrix jacchus ENSCJAG00000002816 I
runx1 Danio rerio ENSDARG00000087646 I
RUNX1 Dasypus novemcinctus ENSDNOG00000015041 I
Runx1 Dipodomys ordii ENSDORG00000004347 I
RUNX1 Equus caballus ENSECAG00000003462 I
RUNX1 Homo sapiens ENSG00000159216 D
RUNX1 Gallus gallus ENSGALG00000016022 I
RUNX1 Gorilla gorilla ENSGGOG00000012862 I
RUNX1 Loxodonta africana ENSLAFG00000004290 I
RUNX1 Microcebus murinus ENSMICG00000011998 I
RUNX1 Macaca mulatta ENSMMUG00000001649 I
RUNX1 Monodelphis domestica ENSMODG00000021051 I
Runx1 Mus musculus ENSMUSG00000022952 D
RUNX1 Oryctolagus cuniculus ENSOCUG00000013731 I
RUNX1 Otolemur garnettii ENSOGAG00000033362 I
RUNX1 Procavia capensis ENSPCAG00000016747 I
RUNX1 Pan troglodytes ENSPTRG00000013883 I
RUNX1 Pteropus vampyrus ENSPVAG00000001606 I
Runx1 Rattus norvegicus ENSRNOG00000001704 I
runx1 Takifugu rubripes ENSTRUG00000012611 I
RUNX1 Tursiops truncatus ENSTTRG00000014160 I
RUNX2 Meleagris gallopavo ENSMGAG00000014267 I
RUNX3 Anolis carolinensis ENSACAG00000017855 I
runx3 Danio rerio ENSDARG00000052826 I
runx3 Gasterosteus aculeatus ENSGACG00000007301 I
runx3 Oryzias latipes ENSORLG00000017515 I
runx3 Tetraodon nigroviridis ENSTNIG00000016911 I
runx3 Takifugu rubripes ENSTRUG00000001517 I
runx3.L Xenopus laevis XB-GENE-6487158 I
RunxA Drosophila melanogaster FBgn0083981 I
RunxB Drosophila melanogaster FBgn0259162 I
Sakowv30005496m.g Saccoglossus kowalevskii Sakowv30005496m.g I
SINV13317 Solenopsis invicta SINV13317 I
SINV13345 Solenopsis invicta SINV13345 I
SINV13356 Solenopsis invicta SINV13356 I
SINV13363 Solenopsis invicta SINV13363 I
Tal_R011874 Tyto alba Tal_R011874 I
TC005566 Tribolium castaneum TC005566 I
TC005796 Tribolium castaneum TC005796 I
TC006536 Tribolium castaneum TC006536 I
TC006542 Tribolium castaneum TC006542 I
tetur01g02340 Tetranychus urticae tetur01g02340 I
XP_002165633.1 Hydra magnipapillata XP_002165633.1 I
XP_002939386 Xenopus tropicalis XP_002939386 I
XP_002939387 Xenopus tropicalis XP_002939387 I
XP_002939388 Xenopus tropicalis XP_002939388 I
YQE_12218 Dendroctonus ponderosae YQE_12218 I