LjSGA_147985.1 (Lotus japonicus)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00319 (SRF-TF) IPR002100 LjSGA_147985.1 T259406_2.00 Superfamily (2010-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AGL80
M06994_2.00 		Arabidopsis thaliana
TCACCA
TGGTGA		 Dap-seq
OMalley et al.(2016)
FEM111_col_a 		0.741 0.741
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
LjSGA_147985.1 MADS box 10 36

Links

Other MADS box family TFs
Other Lotus japonicus TFs

76 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AALB000828 Anopheles albimanus AALB000828 N
AATE015541 Anopheles atroparvus AATE015541 N
ACHR006139 Anopheles christyi ACHR006139 N
ACOM026850 Anopheles coluzzii ACOM026850 N
ADAC009779 Anopheles darlingi ADAC009779 N
ADIR005150 Anopheles dirus ADIR005150 N
AEPI001316 Anopheles epiroticus AEPI001316 N
AFAF000174 Anopheles farauti AFAF000174 N
AFUN008391 Anopheles funestus AFUN008391 N
AGAP009806 Anopheles gambiae AGAP009806 N
AMAM022159 Anopheles maculatus AMAM022159 N
AMEC017406 Anopheles melas AMEC017406 N
AMEM010054 Anopheles merus AMEM010054 N
AMIN009538 Anopheles minimus AMIN009538 N
Cflo_07498--XP_394429.3_APIME Camponotus floridanus Cflo_07498--XP_394429.3_APIME N
GB55837 Apis mellifera GB55837 N
GD21641 Drosophila simulans FBgn0193065 N
GI17432 Drosophila mojavensis FBgn0140176 N
Hsal_06758--XP_394429.3_APIME Harpegnathos saltator Hsal_06758--XP_394429.3_APIME N
NV11070 Nasonia vitripennis NV11070 N