CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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LjT04G17.30.nc
(
Lotus japonicus
)
MADS box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00319 (SRF-TF)
IPR002100
LjT04G17.30.nc
T259408_2.00
Superfamily (2010-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
LjT04G17.30.nc
MADS box
8
56
YISNVTARKATFKKRKKGILKKVRELTILCGIQACLIVFNPFKSEVEVW
Links
Other
MADS box
family TFs
Other
Lotus japonicus
TFs
9 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AMAG_07863
Allomyces macrogynus
AMAG_07863
N
0.000
Cagra.7149s0001
Capsella grandiflora
Cagra.7149s0001
I
0.000
LjSGA_131100.1
Lotus japonicus
LjSGA_131100.1
N
0.000
PAXRUDRAFT_18037
Paxillus rubicundulus
PAXRUDRAFT_18037
N
0.000