CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Bo4g098290
(
Brassica oleracea
)
MBD
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF01429 (MBD)
IPR001739
Bo4g098290
T259933_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Bo4g098290.1
MBD
295
367
VIDKPGIPKTPKGFKRSLVLRKDYSKMDTYYITPAGKKLRSRNEVASFIETNPEFKDAPLRDFTFTVPKVMED
Links
Other
MBD
family TFs
Other
Brassica oleracea
TFs
27 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Bo3g002160
Brassica oleracea
Bo3g002160
N
Bo9g009350
Brassica oleracea
Bo9g009350
N
Bostr.2128s0072
Boechera stricta
Bostr.2128s0072
N
Bra036179
Brassica rapa
Bra036179
N
Bra037494
Brassica rapa
Bra037494
N
Cagra.0154s0026
Capsella grandiflora
Cagra.0154s0026
N
Carubv10000776m.g
Capsella rubella
Carubv10000776m.g
N
TRFL10
Arabidopsis lyrata
fgenesh2_kg.6__290__AT5G03780.1
N