CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Bra040518
(
Brassica rapa
)
MBD
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF01429 (MBD)
IPR001739
Bra040518
T259961_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Bra040518.1-P
MBD
228
344
RHFISERHGVLEDGWHVEFKQPLNGYHLCPVYCSPSGKTFSSIQDVACYLGLATNGNYSCMDTDIRNESSLLQERLNMPKRRKTSRWPNNSFPDLKGSSVSAQLSRFPYNGQTMPPF
Links
Other
MBD
family TFs
Other
Brassica rapa
TFs
9 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AAEL014670
Aedes aegypti
AAEL014670
I
ACHR008952
Anopheles christyi
ACHR008952
I
ACOM033640
Anopheles coluzzii
ACOM033640
N
ACYPI001652
Acyrthosiphon pisum
ACYPI001652
N
AEPI008594
Anopheles epiroticus
AEPI008594
I
AFAF008476
Anopheles farauti
AFAF008476
N
AGAP000512
Anopheles gambiae
AGAP000512
I
Alligator_sinensis_CCG011289.1
Alligator sinensis
Alligator_sinensis_CCG011289.1
I
ALUE_0001723701
Ascaris lumbricoides
ALUE_0001723701
I
AMEC001670
Anopheles melas
AMEC001670
I
ASTEI04517
Anopheles stephensi
ASTEI04517
I
BGIBMGA001129
Bombyx mori
BGIBMGA001129
I
Bm11328
Brugia malayi
Bm11328
I
CLEC025393
Cimex lectularius
CLEC025393
I
CPIJ013490
Culex quinquefasciatus
CPIJ013490
I
CpipJ_CPIJ013490
Culex pipiens
CpipJ_CPIJ013490
I
ECANG7_01760
Echinococcus canadensis
ECANG7_01760
I
ENSCING00000019408
Ciona intestinalis
ENSCING00000019408
I
ENSCSAVG00000007634
Ciona savignyi
ENSCSAVG00000007634
I
ENSGMOG00000015271
Gadus morhua
ENSGMOG00000015271
I
ENSLOCG00000004054
Lepisosteus oculatus
ENSLOCG00000004054
I
ENSNLEG00000017672
Nomascus leucogenys
ENSNLEG00000017672
N
ENSONIG00000005991
Oreochromis niloticus
ENSONIG00000005991
N
ENSP00000355332
Macaca fascicularis
ENSP00000355332
N
ENSPFOG00000003170
Poecilia formosa
ENSPFOG00000003170
I
ENSPPYG00000003475
Pongo abelii
ENSPPYG00000003475
I
ENSPSIG00000006176
Pelodiscus sinensis
ENSPSIG00000006176
I
ENSTSYG00000001514
Tarsius syrichta
ENSTSYG00000001514
N
e_gw.291.69.1
Branchiostoma floridae
e_gw.291.69.1
I
GA21152
Drosophila pseudoobscura
FBgn0081140
I
GE17227
Drosophila yakuba
FBgn0234705
I
GF20188
Drosophila ananassae
FBgn0097195
I
GG17919
Drosophila erecta
FBgn0110139
I
GH12522
Drosophila grimshawi
FBgn0120001
I
GI14876
Drosophila mojavensis
FBgn0137627
I
GJ19539
Drosophila virilis
FBgn0206682
I
GL22923
Drosophila persimilis
FBgn0160513
I
L798_06691
Zootermopsis nevadensis
L798_06691
N
LCUP007338
Lucilia cuprina
LCUP007338
I
MDOA005382
Musca domestica
MDOA005382
I
NEMVEDRAFT_v1g86806
Nematostella vectensis
NEMVEDRAFT_v1g86806
I
NV15824
Nasonia vitripennis
NV15824
N
OFLC_0000413701
Onchocerca flexuosa
OFLC_0000413701
I
PPAI001408
Phlebotomus papatasi
PPAI001408
I
Pvit_05988
Pogona vitticeps
Pvit_05988
I
sd
Drosophila melanogaster
FBgn0003345
D
SMAR011013
Strigamia maritima
SMAR011013
I
Tead1
Rattus norvegicus
ENSRNOG00000015488
I
TEAD1
Oryctolagus cuniculus
ENSOCUG00000007955
I
TEAD1
Homo sapiens
ENSG00000187079
D
TEAD1
Gorilla gorilla
ENSGGOG00000003412
N
TEAD1
Equus caballus
ENSECAG00000008332
I
TEAD1
Macaca mulatta
ENSMMUG00000010875
N
Tead1
Mus musculus
ENSMUSG00000055320
D
TEAD1
Callithrix jacchus
ENSCJAG00000010263
I
TEAD1
Canis familiaris
ENSCAFG00000007976
I
TEAD1
Pan troglodytes
ENSPTRG00000039896
N
TEAD1
Pteropus vampyrus
ENSPVAG00000001503
I
TEAD1
Tursiops truncatus
ENSTTRG00000006621
N
tead1a
Danio rerio
ENSDARG00000028159
I
tead1a
Takifugu rubripes
ENSTRUG00000005940
I
tead1b
Tetraodon nigroviridis
ENSTNIG00000009360
N
tead1b
Danio rerio
ENSDARG00000059483
I
tead1b
Takifugu rubripes
ENSTRUG00000017473
N
tead1b
Gasterosteus aculeatus
ENSGACG00000015715
I
TEAD3
Microcebus murinus
ENSMICG00000000029
I
TEAD3
Canis familiaris
ENSCAFG00000001326
I
TEAD3
Equus caballus
ENSECAG00000015056
I
TEAD3
Loxodonta africana
ENSLAFG00000014818
I
TEAD3
Tursiops truncatus
ENSTTRG00000009434
I
TEAD3
Otolemur garnettii
ENSOGAG00000002943
I
tead3a
Takifugu rubripes
ENSTRUG00000011546
I
TEAD4
Homo sapiens
ENSG00000197905
D
TEAD4
Meleagris gallopavo
ENSMGAG00000013910
I
Tead4
Mus musculus
ENSMUSG00000030353
D
TEAD4
Oryzias latipes
ENSORLG00000002553
I
TsM_000210300
Taenia solium
TsM_000210300
I