CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ORUFI08G06820
(
Oryza rufipogon
)
MBD
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF01429 (MBD)
IPR001739
ORUFI08G06820
T260832_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ORUFI08G06820.1
MBD
272
361
KDDLIVDGLPDGWWKEDRPRKNGSNLKTDPYYIDPVSGYEFRSLKDVHRFLKSGDIYKCIVRPRKRTIQDPYTIENQSHTATLLQHTRPG
ORUFI08G06820.2
MBD
229
318
KDDLIVDGLPDGWWKEDRPRKNGSNLKTDPYYIDPVSGYEFRSLKDVHRFLKSGDIYKCIVRPRKRTIQDPYTIENQSHTATLLQHTRPG
ORUFI08G06820.3
MBD
187
277
KDDLIVDGLPDGWWKEDRPRKNGSNLKTDPYYIDPVSGYEFRSLKDVHRFLKSGDIYKCIVRPRKRTIQDPYTIENQSHTATLLQHTRPGT
ORUFI08G06820.4
MBD
246
334
KDDLIVDGLPDGWWKEDRPRKNGSNLKTDPYYIDPVSGYEFRSLKDVHRFLKSGDIYKCIVRPRKRTIQDPYTIENQSHTATLLQHTRP
ORUFI08G06820.5
MBD
335
423
KDDLIVDGLPDGWWKEDRPRKNGSNLKTDPYYIDPVSGYEFRSLKDVHRFLKSGDIYKCIVRPRKRTIQDPYTIENQSHTATLLQHTRP
Links
Other
MBD
family TFs
Other
Oryza rufipogon
TFs
9 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BGIOSGA028184
Oryza indica
BGIOSGA028184
N
0.743
LPERR08G05670
Leersia perrieri
LPERR08G05670
N
0.839
OBART08G06050
Oryza barthii
OBART08G06050
N
0.986
OGLUM08G06560
Oryza glumaepatula
OGLUM08G06560
N
0.986
OLONG_008033
Oryza longistaminata
OLONG_008033
N
0.986
OMERI08G06100
Oryza meridionalis
OMERI08G06100
N
0.986
ONIVA08G06110
Oryza nivara
ONIVA08G06110
N
0.986
OS08G0206700
Oryza sativa
OS08G0206700
N
0.968