PGSC0003DMG400019633 (Solanum tuberosum)
MBD

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF01429 (MBD) IPR001739 PGSC0003DMG400019633 T260860_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
PGSC0003DMT400050522 MBD 12 88

Links

Other MBD family TFs
Other Solanum tuberosum TFs

3 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
30170.m014365 Ricinus communis 30170.m014365 I
BGIOSGA034185 Oryza indica BGIOSGA034185 I
Bo6g120380 Brassica oleracea Bo6g120380 I
Bo7g014920 Brassica oleracea Bo7g014920 I
Bo7g061470 Brassica oleracea Bo7g061470 I
Bostr.20129s0072 Boechera stricta Bostr.20129s0072 I
Bostr.25542s0020 Boechera stricta Bostr.25542s0020 I
Bra002025 Brassica rapa Bra002025 I
Bra012241 Brassica rapa Bra012241 I
Bra015758 Brassica rapa Bra015758 I
BRADI4G20730 Brachypodium distachyon BRADI4G20730 I
Cagra.1383s0021 Capsella grandiflora Cagra.1383s0021 I
Carubv10004068m.g Capsella rubella Carubv10004068m.g I
Carubv10006357m.g Capsella rubella Carubv10006357m.g I
Ca_09832 Cicer arietinum Ca_09832 I
chr2.CM0102.390.nc Lotus japonicus chr2.CM0102.390.nc I
chr3.LjT23H01.20.nc Lotus japonicus chr3.LjT23H01.20.nc I
Ciclev10018669m.g Citrus clementina Ciclev10018669m.g I
Ciclev10027765m.g Citrus clementina Ciclev10027765m.g I
estExt_gwp_gw1.C_1280044 Physcomitrella patens estExt_gwp_gw1.C_1280044 I
evm.TU.supercontig_9.328 Carica papaya evm.TU.supercontig_9.328 I
fgenesh2_kg.2__1918__AT1G76350.1 Arabidopsis lyrata fgenesh2_kg.2__1918__AT1G76350.1 I
fgenesh2_kg.7__555__AT4G35270.1 Arabidopsis lyrata fgenesh2_kg.7__555__AT4G35270.1 I
gene16194-v1.0-hybrid Fragaria vesca gene16194-v1.0-hybrid I
GLYMA02G48080 Glycine max GLYMA02G48080 I
GLYMA04G00210 Glycine max GLYMA04G00210 I
GLYMA06G00240 Glycine max GLYMA06G00240 I
GLYMA11G13390 Glycine max GLYMA11G13390 I
GLYMA12G05390 Glycine max GLYMA12G05390 I
GLYMA14G00470 Glycine max GLYMA14G00470 I
Gorai.005G126000 Gossypium raimondii Gorai.005G126000 I
Gorai.008G041100 Gossypium raimondii Gorai.008G041100 I
MDP0000239938 Malus domestica MDP0000239938 I
MDP0000246881 Malus domestica MDP0000246881 I
MDP0000265619 Malus domestica MDP0000265619 I
mgf005725m Mimulus guttatus mgf005725m I
MLOC_13610 Hordeum vulgare MLOC_13610 I
MTR_5g099060 Medicago truncatula MTR_5g099060 I
NLP5 Arabidopsis thaliana AT1G76350 I
OGLUM11G08660 Oryza glumaepatula OGLUM11G08660 I
OLONG_006342 Oryza longistaminata OLONG_006342 I
OMERI11G08010 Oryza meridionalis OMERI11G08010 I
ONIVA11G08980 Oryza nivara ONIVA11G08980 I
orange1.1g001774m.g Citrus sinensis orange1.1g001774m.g I
orange1.1g004975m.g Citrus sinensis orange1.1g004975m.g I
ORGLA11G0080000 Oryza glaberrima ORGLA11G0080000 I
ORUFI11G09500 Oryza rufipogon ORUFI11G09500 I
PGSC0003DMG401005796 Solanum tuberosum PGSC0003DMG401005796 I
PK00728.1 Cannabis sativa PK00728.1 I
PK12462.1 Cannabis sativa PK12462.1 I
PK27147.1 Cannabis sativa PK27147.1 I
Pm022106 Prunus mume Pm022106 I
Pm022964 Prunus mume Pm022964 I
POPTR_0002s01060 Populus trichocarpa POPTR_0002s01060 I
POPTR_0005s27310 Populus trichocarpa POPTR_0005s27310 I
PRUPE_ppa000933mg Prunus persica PRUPE_ppa000933mg I
PRUPE_ppa001086mg Prunus persica PRUPE_ppa001086mg I
SapurV1A.0016s0650 Salix purpurea SapurV1A.0016s0650 I
SapurV1A.0374s0230 Salix purpurea SapurV1A.0374s0230 I
SapurV1A.3634s0010 Salix purpurea SapurV1A.3634s0010 I
TCM_006453 Theobroma cacao TCM_006453 I
TCM_019949 Theobroma cacao TCM_019949 I
TCM_034391 Theobroma cacao TCM_034391 I
Thhalv10018128m.g Eutrema salsugineum Thhalv10018128m.g I
Traes_4AL_F5C91EC4A Triticum aestivum Traes_4AL_F5C91EC4A I
TRIUR3_22305 Triticum urartu TRIUR3_22305 I
VIT_03s0038g03710 Vitis vinifera VIT_03s0038g03710 I