fgenesh2_kg.6__2388__AT5G23930.1 (Arabidopsis lyrata)
mTERF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02536 (mTERF) IPR003690 fgenesh2_kg.6__2388__AT5G23930.1 T262700_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AT5G23930
M06996_2.00 		Arabidopsis thaliana
HNYHDCMDYYDYMGCCGCCR
YGGCGGCKRHRRHKGHDRND		 Dap-seq
OMalley et al.(2016)
AT5G23930_col_a 		0.898 0.898
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
fgenesh2_kg.6__2388__AT5G23930.1 mTERF 93 428

Links

Other mTERF family TFs
Other Arabidopsis lyrata TFs

6 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AT5G23930 Arabidopsis thaliana AT5G23930 D 0.898
Bo7g097370 Brassica oleracea Bo7g097370 I 0.783
Bostr.10199s0043 Boechera stricta Bostr.10199s0043 I 0.868
Cagra.0086s0019 Capsella grandiflora Cagra.0086s0019 I 0.891
Carubv10000909m.g Capsella rubella Carubv10000909m.g I 0.888
Thhalv10004187m.g Eutrema salsugineum Thhalv10004187m.g I 0.773