CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Carubv10004425m.g
(
Capsella rubella
)
mTERF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02536 (mTERF)
IPR003690
Carubv10004425m.g
T264643_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Carubv10004425m
mTERF
150
257
FFESLGLCPHEFEPFLPQKLMFLSDDGIMFENFHALCNYGIPRGKIGRMYKEAREIFRYESGLLASKLRDYENLGLSKGTVIKLVTSCPLLLVGGIDAEFSSVVDKLK
Carubv10004425m
mTERF
285
516
IEFLDKVGCKDEKLSSLLKKYPALVIEGSGKKFYVLFGRLFKAGLQVDEIYSLFIDNPEMLSDKCVNNIQKTLDFLIAIKMETQFITKILLGHMELIGSCSLQAPRTACLSLNVRQDELCQILKKEPLRLFSFVSTTNKRKSKPLSEDSRKHSEKTAFLLRLGYLENSDEMVKALKQFRGRGDQLQERFDCLVKAGLNHNVVTEIIRHAPMILNLSKDVIEKKIHSLTELLG
Carubv10004425m
mTERF
428
570
PLSEDSRKHSEKTAFLLRLGYLENSDEMVKALKQFRGRGDQLQERFDCLVKAGLNHNVVTEIIRHAPMILNLSKDVIEKKIHSLTELLGYPIESLVRFPAYLCYDMERIHHRFSMYLWLRERDAAKPMLSPSTILTCGDARFV
Links
Other
mTERF
family TFs
Other
Capsella rubella
TFs
7 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
egg
Drosophila pseudoobscura
FBgn0265021
I
GE11418
Drosophila yakuba
FBgn0229227
I
GF11546
Drosophila ananassae
FBgn0088586
I
GG19893
Drosophila erecta
FBgn0112094
I
GH21540
Drosophila grimshawi
FBgn0129002
I
GI19513
Drosophila mojavensis
FBgn0142251
I
GJ21082
Drosophila virilis
FBgn0208216
I
GK21652
Drosophila willistoni
FBgn0223644
I
GL17699
Drosophila persimilis
FBgn0155302
I
GM11794
Drosophila sechellia
FBgn0166737
I