CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Pavir.Fb01913
(
Panicum virgatum
)
mTERF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02536 (mTERF)
IPR003690
Pavir.Fb01913
T265060_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Pavir.Fb01913.1.p
mTERF
11
323
LAQWLRENGFDEETVARMSRRCKNLHSLDAGEASGVWDYLLTSVKIERRRLRHVVAKCPKVLTLPVDGKLVPTVQCLATLQAKPGEVAQAIAKFPQILFHSVEEKLCPLLAFFQTLGVSEKQLAKLLMVNPRLISYSIEAKFSQMVDFLVGLGIDKEGMIGKILTKEPYIMGYSVDKRLRPTAEFLKSGVGLQGSDLKRVIMSFPDILSRDVDKILRPNLAFLQSCGFSKSQVMALVAGYPPVLIKSVKHCLEPRIKFLVDEMGRDMGEVVDYPQFFRHGLKRSLEYRHKVLKQNKSSCSLSEMLDCNQKKFA
Pavir.Fb01913.2.p
mTERF
11
323
LAQWLRENGFDEETVARMSRRCKNLHSLDAGEASGVWDYLLTSVKIERRRLRHVVAKCPKVLTLPVDGKLVPTVQCLATLQAKPGEVAQAIAKFPQILFHSVEEKLCPLLAFFQTLGVSEKQLAKLLMVNPRLISYSIEAKFSQMVDFLVGLGIDKEGMIGKILTKEPYIMGYSVDKRLRPTAEFLKSGVGLQGSDLKRVIMSFPDILSRDVDKILRPNLAFLQSCGFSKSQVMALVAGYPPVLIKSVKHCLEPRIKFLVDEMGRDMGEVVDYPQFFRHGLKRSLEYRHKVLKQNKSSCSLSEMLDCNQKKFA
Links
Other
mTERF
family TFs
Other
Panicum virgatum
TFs
23 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Gorai.002G219800
Gossypium raimondii
Gorai.002G219800
N
Gorai.010G045700
Gossypium raimondii
Gorai.010G045700
N
PGSC0003DMG400016951
Solanum tuberosum
PGSC0003DMG400016951
N
SapurV1A.0010s0460
Salix purpurea
SapurV1A.0010s0460
N
Solyc04g072460.2
Solanum lycopersicum
Solyc04g072460.2
N
Solyc12g056860.1
Solanum lycopersicum
Solyc12g056860.1
N
TCM_034993
Theobroma cacao
TCM_034993
N