AMTR_s00044p00189590 (Amborella trichopoda)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 AMTR_s00044p00189590 T266201_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
RAX3
M02700_2.00 		Arabidopsis thaliana
SCACCTACCHCCN
NGGDGGTAGGTGS		 SELEX
Mathelier et al.(2014)
MA0576.1 		0.819 0.914
RAX3
M11043_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ATMYB84_01 		0.819 0.914
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ERN17238 Myb 14 62
ERN17238 Myb 68 113

Links

Other Myb/SANT family TFs
Other Amborella trichopoda TFs

456 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSAMEG00000018933 Ailuropoda melanoleuca ENSAMEG00000018933 I
ENSCSAG00000019657 Chlorocebus sabaeus ENSCSAG00000019657 I
ENSMPUG00000020190 Mustela putorius furo ENSMPUG00000020190 I
ENSNLEG00000010553 Nomascus leucogenys ENSNLEG00000010553 I
ENSPANG00000014005 Papio anubis ENSPANG00000014005 I
ENSPPYG00000010427 Pongo abelii ENSPPYG00000010427 I
ENSSTOG00000015924 Ictidomys tridecemlineatus ENSSTOG00000015924 I
ZNF581 Macaca mulatta ENSMMUG00000004805 I
ZNF581 Tursiops truncatus ENSTTRG00000000984 I
ZNF581 Pteropus vampyrus ENSPVAG00000004546 I
ZNF581 Pan troglodytes ENSPTRG00000033802 I
ZNF581 Otolemur garnettii ENSOGAG00000031176 I
ZNF581 Microcebus murinus ENSMICG00000004530 I
ZNF581 Gorilla gorilla ENSGGOG00000015656 I
ZNF581 Homo sapiens ENSG00000171425 D
ZNF581 Felis catus ENSFCAG00000011501 I
ZNF581 Equus caballus ENSECAG00000003138 I
ZNF581 Canis familiaris ENSCAFG00000032256 I
ZNF581 Bos taurus ENSBTAG00000045864 I