RR22 (Oryza indica)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 BGIOSGA022430 T266895_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
e_gw1.362.4.1
M02341_2.00 		Physcomitrella patens
NNNRDATCNN
NNGATHYNNN		 PBM
Weirauch et al.(2014)
pTH8461 		0.791 0.894
estExt_fgenesh1_pg.C_Chr_16.00010090
M02367_2.00 		Ostreococcus tauri
NNNDATCN
NGATHNNN		 PBM
Weirauch et al.(2014)
pTH9644 		0.749 0.851
ARR14
M00873_2.00 		Arabidopsis thaliana
NNAGATHCKS
SMGDATCTNN		 PBM
Franco-Zorrilla et al.(2014)
ARR14 		0.727 0.830
ARR14
M02293_2.00 		Arabidopsis thaliana
NAGATHYBNN
NNVRDATCTN		 PBM
Weirauch et al.(2014)
pTH7531 		0.727 0.830
ARR1
M02296_2.00 		Arabidopsis thaliana
NDGATHYBNN
NNVRDATCHN		 PBM
Weirauch et al.(2014)
pTH8257 		0.726 0.872
ARR1
M02297_2.00 		Arabidopsis thaliana
NAAGATHCKN
NMGDATCTTN		 PBM
Weirauch et al.(2014)
pTH8590 		0.723 0.872
ARR18
M02313_2.00 		Arabidopsis thaliana
NNNNAGATAYGNN
NNCRTATCTNNNN		 PBM
Weirauch et al.(2014)
pTH8840 		0.709 0.809
PK07924.1
M01278_2.00 		Cannabis sativa
NGATHYNNN
NNNRDATCN		 PBM
Lambert et al.(2019)
pTH11431 		0.687 0.809
AT5G05090
M02305_2.00 		Arabidopsis thaliana
NHAGATHCKNN
NNMGDATCTDN		 PBM
Weirauch et al.(2014)
pTH7104 		0.664 0.681
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
BGIOSGA022430-PA Myb 219 269

Links

Other Myb/SANT family TFs
Other Oryza indica TFs

487 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
DUX1_HUMAN Homo sapiens DUX1_HUMAN D
DUX3_HUMAN Homo sapiens DUX3_HUMAN D
DUX4 Homo sapiens ENSG00000260596 D
ENSBTAP00000049813-D1 Bos grunniens ENSBTAP00000049813-D1 I
ENSCJAG00000023408 Callithrix jacchus ENSCJAG00000023408 I
ENSCSAG00000019478 Chlorocebus sabaeus ENSCSAG00000019478 I
ENSGGOG00000013031 Gorilla gorilla ENSGGOG00000013031 I
ENSGGOG00000023520 Gorilla gorilla ENSGGOG00000023520 I
ENSLAFG00000027527 Loxodonta africana ENSLAFG00000027527 N
ENSLAFG00000031588 Loxodonta africana ENSLAFG00000031588 N
ENSMMUG00000014712 Macaca mulatta ENSMMUG00000014712 I
ENSMMUG00000016525 Macaca mulatta ENSMMUG00000016525 I
ENSMMUG00000017616 Macaca mulatta ENSMMUG00000017616 I
ENSMMUP00000019302 Macaca fascicularis ENSMMUP00000019302 I
ENSNLEG00000016146 Nomascus leucogenys ENSNLEG00000016146 I
ENSOARG00000010766 Ovis aries ENSOARG00000010766 I
ENSPPYG00000015280 Pongo abelii ENSPPYG00000015280 I
ENSTSYG00000006219 Tarsius syrichta ENSTSYG00000006219 I
ENSTSYG00000013427 Tarsius syrichta ENSTSYG00000013427 I
ENSTSYG00000019440 Tarsius syrichta ENSTSYG00000019440 I
ENSTSYG00000019450 Tarsius syrichta ENSTSYG00000019450 I
ENSTSYG00000019459 Tarsius syrichta ENSTSYG00000019459 I
ENSTSYG00000019549 Tarsius syrichta ENSTSYG00000019549 I
ENSTSYG00000019556 Tarsius syrichta ENSTSYG00000019556 I