Bo3g004500 (Brassica oleracea)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 Bo3g004500 T267207_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
MYB51
M07010_2.00 		Arabidopsis thaliana
NHNHHNHNNNYYYACCWACYW
WRGTWGGTRRRNNNDNDDNDN		 Dap-seq
OMalley et al.(2016)
MYB51_col_a 		0.706 0.742
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bo3g004500.1 Myb 14 61
Bo3g004500.1 Myb 67 112

Links

Other Myb/SANT family TFs
Other Brassica oleracea TFs

84 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BRADI5G23340 Brachypodium distachyon BRADI5G23340 N
F775_29010 Aegilops tauschii F775_29010 N
GRMZM2G094352 Zea mays GRMZM2G094352 N
LPERR04G22430 Leersia perrieri LPERR04G22430 N
MLOC_61530 Hordeum vulgare MLOC_61530 N
OB04G33590 Oryza brachyantha OB04G33590 N
OPUNC04G24260 Oryza punctata OPUNC04G24260 N
Pavir.Da01921 Panicum virgatum Pavir.Da01921 N
Pavir.Fb00495 Panicum virgatum Pavir.Fb00495 N
Pavir.J20659 Panicum virgatum Pavir.J20659 N
PGSC0003DMG400016951 Solanum tuberosum PGSC0003DMG400016951 N
Si006667m.g Setaria italica Si006667m.g N
Solyc04g072460.2 Solanum lycopersicum Solyc04g072460.2 N
Solyc12g056860.1 Solanum lycopersicum Solyc12g056860.1 N
TGAL6 Oryza sativa OS04G0637000 N
Traes_2BL_9528AAD7C Triticum aestivum Traes_2BL_9528AAD7C N
TRIUR3_28368 Triticum urartu TRIUR3_28368 N