Bo5g155050 (Brassica oleracea)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 Bo5g155050 T267406_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
MYB57
M01072_2.00 		Arabidopsis thaliana
RCCTAAYT
ARTTAGGY		 PBM
Sullivan et al.(2014)
pTH9748 		0.864 0.967
MYB57
M07059_2.00 		Arabidopsis thaliana
YNTACCTAACTHHH
DDDAGTTAGGTANR		 Dap-seq
OMalley et al.(2016)
MYB57_col_a 		0.864 0.967
MYB57
M07060_2.00 		Arabidopsis thaliana
ACCTAAY
RTTAGGT		 Dap-seq
OMalley et al.(2016)
MYB57_colamp_a 		0.864 0.967
MYB05_ANTMA
M11067_2.00 		Antirrhinum majus Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$MYB305_Q3 		0.795 0.848
MYB24
M02311_2.00 		Arabidopsis thaliana
RCCDAMYNN
NNRKTHGGY		 PBM
Weirauch et al.(2014)
pTH8662 		0.791 0.870
MYB62
M07027_2.00 		Arabidopsis thaliana
NHRCCTAAYTWNHNN
NNDNWARTTAGGYDN		 Dap-seq
OMalley et al.(2016)
MYB62_col_a 		0.713 0.772
MYB62
M07028_2.00 		Arabidopsis thaliana
HNKRCCTAACTHH
DDAGTTAGGYMND		 Dap-seq
OMalley et al.(2016)
MYB62_colamp_a 		0.713 0.772
MYB116
M07014_2.00 		Arabidopsis thaliana
NRCCTAAYTWNWNNN
NNNWNWARTTAGGYN		 Dap-seq
OMalley et al.(2016)
MYB116_col_a 		0.707 0.750
MYB116
M07015_2.00 		Arabidopsis thaliana
HNTRCCTAACTHH
DDAGTTAGGYAND		 Dap-seq
OMalley et al.(2016)
MYB116_colamp_a 		0.707 0.750
GAM1_ORYSI
M11055_2.00 		Oryza sativa Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$GAMYB_Q2 		0.671 0.641
MYB108
M07065_2.00 		Arabidopsis thaliana
RCCWAAYYNNNNHNH
DNDNNNNRRTTWGGY		 Dap-seq
OMalley et al.(2016)
BOS1_col_a 		0.668 0.739
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bo5g155050.1 Myb 60 107
Bo5g155050.1 Myb 113 157

Links

Other Myb/SANT family TFs
Other Brassica oleracea TFs

393 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AAEL009092 Aedes aegypti AAEL009092 N
AAL89720 Xenopus laevis AAL89720 N
AEPI009380 Anopheles epiroticus AEPI009380 N
AFAF012002 Anopheles farauti AFAF012002 N
Afo_R008528 Aptenodytes forsteri Afo_R008528 N
AGAP001761 Anopheles gambiae AGAP001761 N
AMEM008456 Anopheles merus AMEM008456 N
cers3.L Xenopus laevis XB-GENE-6251639 N
cers5.S Xenopus laevis XB-GENE-866438 N
Cflo_01607--XP_001123059.1_APIME Camponotus floridanus Cflo_01607--XP_001123059.1_APIME N
DAPPUDRAFT_220106 Daphnia pulex DAPPUDRAFT_220106 N
ENSGACG00000002760 Gasterosteus aculeatus ENSGACG00000002760 N
ENSLOCG00000004390 Lepisosteus oculatus ENSLOCG00000004390 N
ENSMICG00000014767 Microcebus murinus ENSMICG00000014767 N
ENSONIG00000017329 Oreochromis niloticus ENSONIG00000017329 N
ENSSHAG00000001540 Sarcophilus harrisii ENSSHAG00000001540 N
ENSSHAG00000001747 Sarcophilus harrisii ENSSHAG00000001747 N
ENSSHAG00000003870 Sarcophilus harrisii ENSSHAG00000003870 N
ENSXMAG00000010322 Xiphophorus maculatus ENSXMAG00000010322 N
estExt_gwp.C_860189 Branchiostoma floridae estExt_gwp.C_860189 N
e_gw.479.83.1 Branchiostoma floridae e_gw.479.83.1 N
HMEL006147 Heliconius melpomene HMEL006147 N
Hsal_14209--XP_001123059.1_APIME Harpegnathos saltator Hsal_14209--XP_001123059.1_APIME N
KGM_15429 Danaus plexippus KGM_15429 N
L798_00373 Zootermopsis nevadensis L798_00373 N
LotgiG226091 Lottia gigantea LotgiG226091 N
MCINX005366 Melitaea cinxia MCINX005366 N
MCINX005367 Melitaea cinxia MCINX005367 N
Ogr04694 Ophisaurus gracilis Ogr04694 N
SINV20227 Solenopsis invicta SINV20227 N
SINV24013 Solenopsis invicta SINV24013 N