Bo6g097180 (Brassica oleracea)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 Bo6g097180 T267435_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
MYB62
M07027_2.00 		Arabidopsis thaliana
NHRCCTAAYTWNHNN
NNDNWARTTAGGYDN		 Dap-seq
OMalley et al.(2016)
MYB62_col_a 		0.899 0.968
MYB62
M07028_2.00 		Arabidopsis thaliana
HNKRCCTAACTHH
DDAGTTAGGYMND		 Dap-seq
OMalley et al.(2016)
MYB62_colamp_a 		0.899 0.968
MYB116
M07014_2.00 		Arabidopsis thaliana
NRCCTAAYTWNWNNN
NNNWNWARTTAGGYN		 Dap-seq
OMalley et al.(2016)
MYB116_col_a 		0.863 0.914
MYB116
M07015_2.00 		Arabidopsis thaliana
HNTRCCTAACTHH
DDAGTTAGGYAND		 Dap-seq
OMalley et al.(2016)
MYB116_colamp_a 		0.863 0.914
MYB108
M07065_2.00 		Arabidopsis thaliana
RCCWAAYYNNNNHNH
DNDNNNNRRTTWGGY		 Dap-seq
OMalley et al.(2016)
BOS1_col_a 		0.753 0.817
MYB05_ANTMA
M11067_2.00 		Antirrhinum majus Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$MYB305_Q3 		0.735 0.785
MYB24
M02311_2.00 		Arabidopsis thaliana
RCCDAMYNN
NNRKTHGGY		 PBM
Weirauch et al.(2014)
pTH8662 		0.710 0.763
ATMYB121
M07091_2.00 		Arabidopsis thaliana
NYNWACCTAMYHHH
DDDRKTAGGTWNRN		 Dap-seq
OMalley et al.(2016)
MYB121_col_a 		0.707 0.731
MYB57
M01072_2.00 		Arabidopsis thaliana
RCCTAAYT
ARTTAGGY		 PBM
Sullivan et al.(2014)
pTH9748 		0.703 0.742
MYB57
M07059_2.00 		Arabidopsis thaliana
YNTACCTAACTHHH
DDDAGTTAGGTANR		 Dap-seq
OMalley et al.(2016)
MYB57_col_a 		0.703 0.742
MYB57
M07060_2.00 		Arabidopsis thaliana
ACCTAAY
RTTAGGT		 Dap-seq
OMalley et al.(2016)
MYB57_colamp_a 		0.703 0.742
Q2TCH0_PETHY
M11072_2.00 		Petunia x hybrida Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$PH4_01 		0.692 0.667
MYB59
M00883_2.00 		Arabidopsis thaliana
NKACCTAAYN
NRTTAGGTMN		 PBM
Franco-Zorrilla et al.(2014)
MYB59 		0.661 0.688
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bo6g097180.1 Myb 20 67
Bo6g097180.1 Myb 73 118

Links

Other Myb/SANT family TFs
Other Brassica oleracea TFs

678 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
A1O1_04217 Capronia coronata A1O1_04217 I
A1O3_01201 Capronia epimyces A1O3_01201 I
A1O5_10463 Cladophialophora psammophila A1O5_10463 I
A1O7_02244 Cladophialophora yegresii A1O7_02244 I
A1O9_07137 Exophiala aquamarina A1O9_07137 I
AOL_s00193g129 Arthrobotrys oligospora AOL_s00193g129 I
ARB_04706 Arthroderma benhamiae ARB_04706 I
AUEXF2481DRAFT_36932 Aureobasidium subglaciale AUEXF2481DRAFT_36932 I
Bcin01g10720 Botrytis cinerea Bcin01g10720 I
CFIO01_06850 Colletotrichum fioriniae CFIO01_06850 I
CGGC5_1402 Colletotrichum gloeosporioides CGGC5_1402 I
CH063_07689 Colletotrichum higginsianum CH063_07689 I
Cob_09205 Colletotrichum orbiculare Cob_09205 I
Cob_11078 Colletotrichum orbiculare Cob_11078 I
CTHT_0041740 Chaetomium thermophilum CTHT_0041740 I
G647_08755 Cladophialophora carrionii G647_08755 I
GGTG_07647 Gaeumannomyces graminis GGTG_07647 I
GLRG_06548 Colletotrichum graminicola GLRG_06548 I
GMDG_04247 Pseudogymnoascus destructans GMDG_04247 I
H072_4417 Dactylellina haptotyla H072_4417 I
H101_03147 Trichophyton interdigitale H101_03147 I
H102_02228 Trichophyton rubrum H102_02228 I
H105_02247 Trichophyton soudanense H105_02247 I
HMPREF1120_08353 Exophiala dermatitidis HMPREF1120_08353 I
HMPREF1541_00985 Cyphellophora europaea HMPREF1541_00985 I
M438DRAFT_395358 Aureobasidium pullulans M438DRAFT_395358 I
MCYG_06105 Arthroderma otae MCYG_06105 I
MCYG_06105 Microsporum canis MCYG_06105 I
MGG_07925 Magnaporthe oryzae MGG_07925 I
MGYG_05848 Microsporum gypseum MGYG_05848 I
MPH_04494 Macrophomina phaseolina MPH_04494 I
NCU05637 Neurospora crassa NCU05637 D
NEUTE1DRAFT_148609 Neurospora tetrasperma NEUTE1DRAFT_148609 I
OIDMADRAFT_28300 Oidiodendron maius OIDMADRAFT_28300 I
PMAA_011030 Penicillium marneffei PMAA_011030 I
PMAA_011030 Talaromyces marneffei PMAA_011030 I
PTT_11477 Pyrenophora teres PTT_11477 I
PV04_02426 Capronia semiimmersa PV04_02426 I
PV05_07246 Exophiala xenobiotica PV05_07246 I
PV06_04883 Exophiala oligosperma PV06_04883 I
PV07_02793 Cladophialophora immunda PV07_02793 I
PV08_03176 Exophiala spinifera PV08_03176 I
PV09_00512 Verruconis gallopava PV09_00512 I
PV10_00855 Exophiala mesophila PV10_00855 I
PV11_03606 Exophiala sideris PV11_03606 I
SAPIO_CDS9377 Scedosporium apiospermum SAPIO_CDS9377 I
SBOR_0775 Sclerotinia borealis SBOR_0775 I
TEQG_07049 Trichophyton equinum TEQG_07049 I
TESG_07963 Trichophyton tonsurans TESG_07963 I
THITE_2126380 Thielavia terrestris THITE_2126380 I
TRV_07523 Trichophyton verrucosum TRV_07523 I
TSTA_006150 Talaromyces stipitatus TSTA_006150 I
UCREL1_4517 Eutypa lata UCREL1_4517 I
UCRPA7_1223 Togninia minima UCRPA7_1223 I
V499_07415 Pseudogymnoascus pannorum V499_07415 I
VDBG_10032 Verticillium alfalfae VDBG_10032 I
VDBG_10032 Verticillium albo atrum VDBG_10032 I
Z517_00407 Fonsecaea pedrosoi Z517_00407 I
Z518_01937 Rhinocladiella mackenziei Z518_01937 I
Z518_04811 Rhinocladiella mackenziei Z518_04811 I
Z519_11340 Cladophialophora bantiana Z519_11340 I