Bra012579 (Brassica rapa)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 Bra012579 T267844_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
MYB98
M02301_2.00 		Arabidopsis thaliana
NNGTAACGKMN
NKMCGTTACNN		 PBM
Weirauch et al.(2014)
pTH8148 		0.829 0.935
MYB98
M07108_2.00 		Arabidopsis thaliana
DWWWHGTAACGKWHD
HDWMCGTTACDWWWH		 Dap-seq
OMalley et al.(2016)
MYB98_col_a 		0.829 0.935
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bra012579.1-P Myb 182 228
Bra012579.1-P Myb 234 279

Links

Other Myb/SANT family TFs
Other Brassica rapa TFs

83 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Brh_R001450 Buceros rhinoceros Brh_R001450 I
ENSCAFG00000009797 Canis familiaris ENSCAFG00000009797 I
ENSCSAG00000012146 Chlorocebus sabaeus ENSCSAG00000012146 I
ENSGALG00000025974 Gallus gallus ENSGALG00000025974 I
ENSMPUG00000012539 Mustela putorius furo ENSMPUG00000012539 I
ENSNLEG00000006726 Nomascus leucogenys ENSNLEG00000006726 I
ENSOARG00000013903 Ovis aries ENSOARG00000013903 I
ENSP00000351255-D1 Bos grunniens ENSP00000351255-D1 I
ENSPANG00000022795 Papio anubis ENSPANG00000022795 I
ENSPPYG00000013028 Pongo abelii ENSPPYG00000013028 I
ENSPSIG00000010185 Pelodiscus sinensis ENSPSIG00000010185 I
Stat1 Rattus norvegicus ENSRNOG00000014079 I
STAT1 Bos taurus ENSBTAG00000007867 I
STAT4 Sus scrofa ENSSSCG00000016059 I
STAT4 Tursiops truncatus ENSTTRG00000001136 I
STAT4 Ochotona princeps ENSOPRG00000008636 I
STAT4 Otolemur garnettii ENSOGAG00000003042 I
STAT4 Vicugna pacos ENSVPAG00000011545 I
Stat4 Mus musculus ENSMUSG00000062939 D
STAT4 Oryctolagus cuniculus ENSOCUG00000002466 I
STAT4 Monodelphis domestica ENSMODG00000011767 I
STAT4 Macaca mulatta ENSMMUG00000005617 I
STAT4 Meleagris gallopavo ENSMGAG00000016413 I
STAT4 Loxodonta africana ENSLAFG00000012299 I
STAT4 Homo sapiens ENSG00000138378 D
STAT4 Felis catus ENSFCAG00000018634 I
STAT4 Erinaceus europaeus ENSEEUG00000002778 I
STAT4 Equus caballus ENSECAG00000023170 I
Stat4 Dipodomys ordii ENSDORG00000011535 I
STAT4 Callithrix jacchus ENSCJAG00000005895 I
STAT4 Choloepus hoffmanni ENSCHOG00000006838 I
Tal_R001379 Tyto alba Tal_R001379 I