Bra036035 (Brassica rapa)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 Bra036035 T268108_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
TRB2
M02314_2.00 		Arabidopsis thaliana
WRMCCTAR
YTAGGKYW		 PBM
Weirauch et al.(2014)
pTH7094 		0.664 0.638
TRB2
M01083_2.00 		Arabidopsis thaliana
HRMCCTAR
YTAGGKYD		 PBM
Sullivan et al.(2014)
pTH7260 		0.664 0.638
TRB2
M07157_2.00 		Arabidopsis thaliana
HHHHHNWWRCCCTAAWHHN
NDDWTTAGGGYWWNDDDDD		 Dap-seq
OMalley et al.(2016)
TBP3_col_a 		0.664 0.638
TRB2
M07158_2.00 		Arabidopsis thaliana
HVDHHHNWARCCCTAAHYH
DRDTTAGGGYTWNDDDHBD		 Dap-seq
OMalley et al.(2016)
TBP3_colamp_a 		0.664 0.638
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bra036035.1-P Myb 5 57

Links

Other Myb/SANT family TFs
Other Brassica rapa TFs

33 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
CBG13574 Caenorhabditis briggsae CBG13574 I 0.000
CBN06713 Caenorhabditis brenneri CBN06713 I 0.000
L892_g2782 Steinernema scapterisci L892_g2782 I 0.000
PTRK_0001404900 Parastrongyloides trichosuri PTRK_0001404900 N 0.000
SPAL_0000226900 Strongyloides papillosus SPAL_0000226900 N 0.000
SPAL_0001649800 Strongyloides papillosus SPAL_0001649800 N 0.000
SSTP_0000133400 Strongyloides stercoralis SSTP_0000133400 N 0.000
SVE_1003800 Strongyloides venezuelensis SVE_1003800 N 0.000
SVE_1744300 Strongyloides venezuelensis SVE_1744300 N 0.000