CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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CGGC5_5306
(
Colletotrichum gloeosporioides
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00249 (Myb_DNA-binding)
IPR014778
CGGC5_5306
T268620_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
NCU02182
M01273_2.00
Neurospora crassa
WACCCAB
VTGGGTW
PBM
Lambert et al.(2019)
pTH8920
0.809
0.846
For this family, TFs with SR scores >
0.661
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ELA34914
Myb
247
296
RRKWSEAETNHLLLGVNRHGVGKWTDILADPDFNFNDRTAGDLKDRFRTC
ELA34914
Myb
393
441
RRPFTDQDDKQILEGLDKYGPAWTKIQRDSRFSLSGRQPTDLRDRVRNK
Links
Other
Myb/SANT
family TFs
Other
Colletotrichum gloeosporioides
TFs
49 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BGIOSGA006734
Oryza indica
BGIOSGA006734
I
0.000
BGIOSGA007649
Oryza indica
BGIOSGA007649
I
0.000
GRMZM2G098904
Zea mays
GRMZM2G098904
I
0.000
LPERR02G04950
Leersia perrieri
LPERR02G04950
I
0.000
MDP0000431572
Malus domestica
MDP0000431572
I
0.000
OBART02G05680
Oryza barthii
OBART02G05680
I
0.000
OBART02G11580
Oryza barthii
OBART02G11580
I
0.000
OGLUM02G05620
Oryza glumaepatula
OGLUM02G05620
I
0.000
OGLUM02G11500
Oryza glumaepatula
OGLUM02G11500
I
0.000
OMERI02G06470
Oryza meridionalis
OMERI02G06470
I
0.000
OMERI02G12230
Oryza meridionalis
OMERI02G12230
I
0.000
ONIVA02G06040
Oryza nivara
ONIVA02G06040
I
0.000
ONIVA02G12920
Oryza nivara
ONIVA02G12920
I
0.000
OPUNC02G10230
Oryza punctata
OPUNC02G10230
I
0.000
ORGLA02G0052000
Oryza glaberrima
ORGLA02G0052000
I
0.000
ORGLA02G0104200
Oryza glaberrima
ORGLA02G0104200
I
0.000
ORUFI02G05790
Oryza rufipogon
ORUFI02G05790
I
0.000
ORUFI02G11610
Oryza rufipogon
ORUFI02G11610
I
0.000
OS02G0175100
Oryza sativa
OS02G0175100
I
0.000
OS02G0266800
Oryza sativa
OS02G0266800
D
0.000
Pavir.Aa03364
Panicum virgatum
Pavir.Aa03364
I
0.000
Pavir.Ab00505
Panicum virgatum
Pavir.Ab00505
I
0.000
PDK_20s1417191g003
Phoenix dactylifera
PDK_20s1417191g003
I
0.000
Sb04g005020
Sorghum bicolor
Sb04g005020
I
0.000
Si017778m.g
Setaria italica
Si017778m.g
I
0.000