fgenesh1_pg.C_scaffold_6002971 (Arabidopsis lyrata)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 fgenesh1_pg.C_scaffold_6002971 T270681_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AT1G14600
M01268_2.00 		Arabidopsis thaliana
NWAYATTCYN
NRGAATRTWN		 PBM
Lambert et al.(2019)
pTH11557 		0.685 0.638
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
fgenesh1_pg.C_scaffold_6002971 Myb 16 67

Links

Other Myb/SANT family TFs
Other Arabidopsis lyrata TFs

11 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Pc06g01940 Penicillium chrysogenum Pc06g01940 N
Pc09g00040 Penicillium chrysogenum Pc09g00040 N
PCH_Pc06g01940 Penicillium rubens PCH_Pc06g01940 N
PCH_Pc09g00040 Penicillium rubens PCH_Pc09g00040 N
PCH_Pc15g01670 Penicillium rubens PCH_Pc15g01670 N
PDE_03981 Penicillium oxalicum PDE_03981 N
PDIP_39280 Penicillium digitatum PDIP_39280 N
PITC_018430 Penicillium italicum PITC_018430 N