CIS-BP Database: Catalog of Inferred Sequence Binding Preferences

TF Information

ATMYB102 *(Arabidopsis lyrata)* Myb/SANT
Pfam ID	Interpro ID	Gene ID	CIS-BP ID	Sequence source	Animal TF db
PF00249 (Myb_DNA-binding)	IPR014778	fgenesh2_kg.7__2173__AT4G21440.1	T270835_2.00	Ensembl (2018-Dec-8)	Link out
Directly determined binding motifs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No direct experiments
Motifs from related TFs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
PK28187.1 M01286_2.00	Cannabis sativa	TACCTACC	GGTAGGTA	PBM Lambert et al.(2019) pTH11305	0.860	0.957
AtMYB74 M07104_2.00	Arabidopsis thaliana	NYYYACCTAMYWHH	DDWRKTAGGTRRRN	Dap-seq OMalley et al.(2016) MYB74_colamp_a	0.827	0.925
AtMYB74 M07105_2.00	Arabidopsis thaliana	BYHYACCTAMYHHH	DDDRKTAGGTRDRV	Dap-seq OMalley et al.(2016) MYB74_col	0.827	0.925
AtMYB41 M07109_2.00	Arabidopsis thaliana	DHDBBYYACCTAMYW	WRKTAGGTRRVVHDH	Dap-seq OMalley et al.(2016) MYB41_col_a	0.777	0.903
MYB39 M07106_2.00	Arabidopsis thaliana	NYYYACCTAMYWHH	DDWRKTAGGTRRRN	Dap-seq OMalley et al.(2016) MYB39_col_a	0.724	0.731
MYB39 M07107_2.00	Arabidopsis thaliana	NYYYACCWAMYWHHHHHHHNH	DNDDDDDDDWRKTWGGTRRRN	Dap-seq OMalley et al.(2016) MYB39_colamp_a	0.724	0.731
MYB49 M07140_2.00	Arabidopsis thaliana	HDBBYYACCWAMYWH	DWRKTWGGTRRVVHD	Dap-seq OMalley et al.(2016) MYB49_col_a	0.677	0.828
MYB49 M07141_2.00	Arabidopsis thaliana	NYYYACCTAMYWHN	NDWRKTAGGTRRRN	Dap-seq OMalley et al.(2016) MYB49_colamp_a	0.677	0.828
MYB92 M07123_2.00	Arabidopsis thaliana	NHHACCTAMY	RKTAGGTDDN	Dap-seq OMalley et al.(2016) MYB92_100ng20cy_b	0.675	0.763
MYB92 M07124_2.00	Arabidopsis thaliana	NNNNWNNYYYACCWAMYHH	DDRKTWGGTRRRNNWNNNN	Dap-seq OMalley et al.(2016) MYB92_colamp_a	0.675	0.763
MYB107 M07061_2.00	Arabidopsis thaliana	NDDWDBBYYACCWAMYHH	DDRKTWGGTRRVVHWHHN	Dap-seq OMalley et al.(2016) MYB107_col_a	0.674	0.785
MYB107 M07062_2.00	Arabidopsis thaliana	WNBYYYACCWAMYH	DRKTWGGTRRRVNW	Dap-seq OMalley et al.(2016) MYB107_colamp_a	0.674	0.785
MYB58 M07005_2.00	Arabidopsis thaliana	NNYYYACCWAMCHHH	DDDGKTWGGTRRRNN	Dap-seq OMalley et al.(2016) MYB58_col_a	0.661	0.699
MYB58 M07006_2.00	Arabidopsis thaliana	HNNYHYACCWAMCHHHNNNNH	DNNNNDDDGKTWGGTRDRNND	Dap-seq OMalley et al.(2016) MYB58_colamp_a	0.661	0.699
For this family, TFs with SR scores > 0.661* will likely have a similar motif*

DNA Binding Domains

Protein ID	Domain	From	To	Sequence
fgenesh2_kg.7__2173__AT4G21440.1	Myb	14	61	KGPWTSEEDQKLVDYIHKHGYGNWRTLPKNAGLQRCGKSCRLRWTNYL
fgenesh2_kg.7__2173__AT4G21440.1	Myb	67	112	RGRFSFEEEETIIQLHSFLGNKWSAIAARLPGRTDNEIKNFWNTHI

Links
Other Myb/SANT family TFs
Other *Arabidopsis lyrata* TFs

427 Related TFs

Name	Species	Gene ID	Motif Evidence	SR Score	Action
NV15844	Nasonia vitripennis	NV15844	N
WUBG_15783	Wuchereria bancrofti	WUBG_15783	N

ATMYB102 (Arabidopsis lyrata) Myb/SANT

TF Information

Directly determined binding motifs

Motifs from related TFs

DNA Binding Domains

Links

427 Related TFs

ATMYB102 **(Arabidopsis lyrata)
Myb/SANT**