RVE2 (Arabidopsis lyrata)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 fgenesh2_kg.7__3122__AT5G37260.1 T270841_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PK08316.1
M02350_2.00 		Cannabis sativa
NNNRWATCNN
NNGATWYNNN		 PBM
Weirauch et al.(2014)
pTH9488 		0.862 0.870
RVE1
M00879_2.00 		Arabidopsis thaliana
AAATATCT
AGATATTT		 PBM
Franco-Zorrilla et al.(2014)
RVE1 		0.814 0.891
RVE1
M07128_2.00 		Arabidopsis thaliana
NNNWAAATATCTNN
NNAGATATTTWNNN		 Dap-seq
OMalley et al.(2016)
RVE1_col_a 		0.814 0.891
RVE1
M07129_2.00 		Arabidopsis thaliana
NNWAATATCW
WGATATTWNN		 Dap-seq
OMalley et al.(2016)
RVE1_colamp_a 		0.814 0.891
LHY
M06997_2.00 		Arabidopsis thaliana
NWAAATATCT
AGATATTTWN		 Dap-seq
OMalley et al.(2016)
LHY1_col_a 		0.800 0.848
LHY
M06998_2.00 		Arabidopsis thaliana
NNWAAATATCT
AGATATTTWNN		 Dap-seq
OMalley et al.(2016)
LHY1_colamp_a 		0.800 0.848
OS08G0157600
M02330_2.00 		Oryza sativa
DNRTATCHN
NDGATAYNH		 PBM
Weirauch et al.(2014)
pTH7793 		0.792 0.891
RVE7
M01069_2.00 		Arabidopsis thaliana
NDHRWATCNN
NNGATWYDHN		 PBM
Sullivan et al.(2014)
pTH7081 		0.779 0.783
RVE7
M02286_2.00 		Arabidopsis thaliana
NDARTATCH
DGATAYTHN		 PBM
Weirauch et al.(2014)
pTH7277 		0.779 0.783
RVE7L
M07071_2.00 		Arabidopsis thaliana
NNNNWAAATATCWNN
NNWGATATTTWNNNN		 Dap-seq
OMalley et al.(2016)
AT3G10113_col_a 		0.779 0.783
RVE7
M07008_2.00 		Arabidopsis thaliana
NNWAAATATCT
AGATATTTWNN		 Dap-seq
OMalley et al.(2016)
EPR1_colamp_a 		0.779 0.783
RVE7
M07009_2.00 		Arabidopsis thaliana
NWAAATATCTHN
NDAGATATTTWN		 Dap-seq
OMalley et al.(2016)
EPR1_col 		0.779 0.783
CCA1
M00875_2.00 		Arabidopsis thaliana
NDNRWATCN
NGATWYNHN		 PBM
Franco-Zorrilla et al.(2014)
CCA1 		0.752 0.804
CCA1
M11039_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$CCA1_Q5 		0.752 0.804
RVE5
M01079_2.00 		Arabidopsis thaliana
NWAATATCHN
NDGATATTWN		 PBM
Sullivan et al.(2014)
pTH7138 		0.700 0.652
RVE5
M07100_2.00 		Arabidopsis thaliana
NNAAAATATCT
AGATATTTTNN		 Dap-seq
OMalley et al.(2016)
At4g01280_col_a 		0.700 0.652
RVE5
M07101_2.00 		Arabidopsis thaliana
NNWAAATATCT
AGATATTTWNN		 Dap-seq
OMalley et al.(2016)
At4g01280_colamp_a 		0.700 0.652
RVE8
M01074_2.00 		Arabidopsis thaliana
NNNRWATCNN
NNGATWYNNN		 PBM
Sullivan et al.(2014)
pTH7136 		0.693 0.652
PK02532.1
M02347_2.00 		Cannabis sativa
WAATATCTN
NAGATATTW		 PBM
Weirauch et al.(2014)
pTH9579 		0.693 0.652
RVE8
M07069_2.00 		Arabidopsis thaliana
NHNWAAATATCT
AGATATTTWNDN		 Dap-seq
OMalley et al.(2016)
At3g09600_col_a 		0.693 0.652
RVE8
M07070_2.00 		Arabidopsis thaliana
NNWAAATATCT
AGATATTTWNN		 Dap-seq
OMalley et al.(2016)
At3g09600_colamp_a 		0.693 0.652
RVE4
M07117_2.00 		Arabidopsis thaliana
NNWAAATATCT
AGATATTTWNN		 Dap-seq
OMalley et al.(2016)
LCL1_colamp_a 		0.693 0.652
RVE4
M07118_2.00 		Arabidopsis thaliana
NAAAATATCT
AGATATTTTN		 Dap-seq
OMalley et al.(2016)
LCL1_col 		0.693 0.652
RVE6
M01081_2.00 		Arabidopsis thaliana
AATATCTD
HAGATATT		 PBM
Sullivan et al.(2014)
pTH7151 		0.683 0.630
RVE6
M07138_2.00 		Arabidopsis thaliana
NNAAAATATCT
AGATATTTTNN		 Dap-seq
OMalley et al.(2016)
At5g52660_col_a 		0.683 0.630
RVE6
M07139_2.00 		Arabidopsis thaliana
NNNWAAATATCT
AGATATTTWNNN		 Dap-seq
OMalley et al.(2016)
At5g52660_colamp_a 		0.683 0.630
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
fgenesh2_kg.7__3122__AT5G37260.1 Myb 35 80

Links

Other Myb/SANT family TFs
Other Arabidopsis lyrata TFs

461 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
A1O1_01715 Capronia coronata A1O1_01715 I 0.000
A1O3_08338 Capronia epimyces A1O3_08338 N 0.000
A1O5_11047 Cladophialophora psammophila A1O5_11047 N 0.000
A1O7_05233 Cladophialophora yegresii A1O7_05233 N 0.000
A1O9_12607 Exophiala aquamarina A1O9_12607 N 0.000
AB06230.1 Alternaria brassicicola AB06230.1 I 0.000
ACLA_027040 Aspergillus clavatus CADACLAG00002999 I 0.000
ACRE_005080 Acremonium chrysogenum ACRE_005080 I 0.000
ARB_04236 Arthroderma benhamiae ARB_04236 I 0.000
AUEXF2481DRAFT_1990 Aureobasidium subglaciale AUEXF2481DRAFT_1990 I 0.000
BAUCODRAFT_53101 Baudoinia compniacensis BAUCODRAFT_53101 I 0.000
BBA_03162 Beauveria bassiana BBA_03162 I 0.000
Bcin02g02300 Botrytis cinerea Bcin02g02300 I 0.000
BDDG_09774 Blastomyces dermatitidis BDDG_09774 I 0.000
BGHDH14_bgh06823 Blumeria graminis BGHDH14_bgh06823 I 0.000
CADAFLAG00004136 Aspergillus flavus CADAFLAG00004136 I 0.000
CADANGAG00006293 Aspergillus niger CADANGAG00006293 I 0.000
CCM_04761 Cordyceps militaris CCM_04761 I 0.000
CFIO01_13406 Colletotrichum fioriniae CFIO01_13406 I 0.000
CGGC5_10716 Colletotrichum gloeosporioides CGGC5_10716 I 0.000
CH063_01246 Colletotrichum higginsianum CH063_01246 I 0.000
CHGG_10355 Chaetomium globosum CHGG_10355 I 0.000
CIMG_02531 Coccidioides immitis CIMG_02531 I 0.000
CMQ_4895 Grosmannia clavigera CMQ_4895 I 0.000
Cob_07346 Colletotrichum orbiculare Cob_07346 I 0.000
COCC4DRAFT_22296 Bipolaris maydis COCC4DRAFT_22296 I 0.000
COCCADRAFT_82828 Bipolaris zeicola COCCADRAFT_82828 I 0.000
COCMIDRAFT_85952 Bipolaris oryzae COCMIDRAFT_85952 I 0.000
COCSADRAFT_102218 Bipolaris sorokiniana COCSADRAFT_102218 I 0.000
COCVIDRAFT_85650 Bipolaris victoriae COCVIDRAFT_85650 I 0.000
CPC735_037910 Coccidioides posadasii CPC735_037910 I 0.000
CPUR_08385 Claviceps purpurea CPUR_08385 I 0.000
CSUB01_09077 Colletotrichum sublineola CSUB01_09077 I 0.000
CTHT_0008390 Chaetomium thermophilum CTHT_0008390 I 0.000
DOTSEDRAFT_69772 Dothistroma septosporum DOTSEDRAFT_69772 I 0.000
EPUS_06822 Endocarpon pusillum EPUS_06822 I 0.000
EURHEDRAFT_22412 Aspergillus ruber EURHEDRAFT_22412 I 0.000
EV44_g0919 Erysiphe necator EV44_g0919 I 0.000
F503_04373 Ophiostoma piceae uamh F503_04373 I 0.000
FFUJ_00821 Fusarium fujikuroi FFUJ_00821 I 0.000
fgenesh1_pg.C_scaffold_12000199 Cochliobolus heterostrophus C5 fgenesh1_pg.C_scaffold_12000199 I 0.000
fgenesh1_pg.sca_1_chr1_3_0000687 Nectria haematococca fgenesh1_pg.sca_1_chr1_3_0000687 I 0.000
fgenesh3_pm.C_scaffold_10000323 Neurospora discreta fgenesh3_pm.C_scaffold_10000323 I 0.000
FGRRES_00318 Fusarium graminearum FGRRES_00318 I 0.000
FPSE_07692 Fusarium pseudograminearum FPSE_07692 I 0.000
G647_03448 Cladophialophora carrionii G647_03448 I 0.000
GGTG_12982 Gaeumannomyces graminis GGTG_12982 I 0.000
GLRG_07358 Colletotrichum graminicola GLRG_07358 I 0.000
GMDG_00077 Pseudogymnoascus destructans GMDG_00077 I 0.000
gw1.2.720.1 Cryphonectria parasitica gw1.2.720.1 I 0.000
gw1.2.915.1 Mycosphaerella graminicola gw1.2.915.1 I 0.000
H101_04388 Trichophyton interdigitale H101_04388 I 0.000
H102_02726 Trichophyton rubrum H102_02726 I 0.000
H105_02744 Trichophyton soudanense H105_02744 I 0.000
HCBG_07944 Histoplasma capsulatum HCBG_07944 I 0.000
HMPREF1120_09254 Exophiala dermatitidis HMPREF1120_09254 N 0.000
HMPREF1541_11021 Cyphellophora europaea HMPREF1541_11021 N 0.000
HMPREF1624_03400 Sporothrix schenckii HMPREF1624_03400 I 0.000
LEMA_P100750.1 Leptosphaeria maculans LEMA_P100750.1 I 0.000
M437DRAFT_12002 Aureobasidium melanogenum M437DRAFT_12002 I 0.000
M438DRAFT_283552 Aureobasidium pullulans M438DRAFT_283552 I 0.000
MAJ_07299 Metarhizium majus MAJ_07299 I 0.000
MAM_00987 Metarhizium album MAM_00987 I 0.000
MANI_017733 Metarhizium anisopliae MANI_017733 I 0.000
MAPG_08672 Magnaporthe poae MAPG_08672 I 0.000
MBM_02301 Marssonina brunnea MBM_02301 I 0.000
MBR_05142 Metarhizium brunneum MBR_05142 I 0.000
MCYG_05302 Microsporum canis MCYG_05302 I 0.000
MCYG_05302 Arthroderma otae MCYG_05302 I 0.000
MGG_15357 Magnaporthe oryzae MGG_15357 I 0.000
MGU_01530 Metarhizium guizhouense MGU_01530 I 0.000
MGYG_06353 Microsporum gypseum MGYG_06353 I 0.000
MYCFIDRAFT_150925 Pseudocercospora fijiensis MYCFIDRAFT_150925 I 0.000
Mycgr3G18493 Zymoseptoria tritici Mycgr3G18493 I 0.000
MYCTH_109046 Myceliophthora thermophila MYCTH_109046 I 0.000
NCU01706 Neurospora crassa NCU01706 D 0.000
NechaG75076 Fusarium solani NechaG75076 I 0.000
NEUTE1DRAFT_101778 Neurospora tetrasperma NEUTE1DRAFT_101778 I 0.000
OCS_06093 Ophiocordyceps sinensis OCS_06093 I 0.000
Pc12g05270 Penicillium chrysogenum Pc12g05270 I 0.000
PCH_Pc12g05270 Penicillium rubens PCH_Pc12g05270 I 0.000
PDE_02360 Penicillium oxalicum PDE_02360 I 0.000
PDIP_34590 Penicillium digitatum PDIP_34590 I 0.000
PEX1_091250 Penicillium expansum PEX1_091250 I 0.000
PITC_075220 Penicillium italicum PITC_075220 I 0.000
PMAA_096140 Talaromyces marneffei PMAA_096140 I 0.000
PMAA_096140 Penicillium marneffei PMAA_096140 I 0.000
PODANS_3_6670 Podospora anserina PODANS_3_6670 I 0.000
PTRG_03662 Pyrenophora triticirepentis PTRG_03662 I 0.000
PTT_06541 Pyrenophora teres PTT_06541 I 0.000
PV04_03970 Capronia semiimmersa PV04_03970 N 0.000
PV05_06707 Exophiala xenobiotica PV05_06707 N 0.000
PV10_03876 Exophiala mesophila PV10_03876 I 0.000
PVAR5_6000 Byssochlamys spectabilis PVAR5_6000 I 0.000
S40285_03377 Stachybotrys chlorohalonata S40285_03377 I 0.000
S40288_05289 Stachybotrys chartarum S40288_05289 I 0.000
SEPMUDRAFT_123869 Sphaerulina musiva SEPMUDRAFT_123869 I 0.000
SETTUDRAFT_176508 Setosphaeria turcica SETTUDRAFT_176508 I 0.000
SNOG_01243 Stagonospora nodorum SNOG_01243 I 0.000
SNOG_01243 Phaeosphaeria nodorum SNOG_01243 I 0.000
SPBR_01773 Sporothrix brasiliensis SPBR_01773 I 0.000
SS1G_01859 Sclerotinia sclerotiorum SS1G_01859 I 0.000
TEQG_06211 Trichophyton equinum TEQG_06211 I 0.000
TESG_03699 Trichophyton tonsurans TESG_03699 I 0.000
THITE_16965 Thielavia terrestris THITE_16965 I 0.000
TRIATDRAFT_289913 Trichoderma atroviride TRIATDRAFT_289913 I 0.000
TRIREDRAFT_1941 Trichoderma reesei TRIREDRAFT_1941 I 0.000
TRV_05271 Trichophyton verrucosum TRV_05271 I 0.000
TSTA_045180 Talaromyces stipitatus TSTA_045180 I 0.000
U727_0043108001 Penicillium solitum U727_0043108001 I 0.000
UCREL1_549 Eutypa lata UCREL1_549 I 0.000
UV8b_756 Ustilaginoidea virens UV8b_756 I 0.000
VDAG_06776 Verticillium dahliae VDAG_06776 I 0.000
W97_01044 Coniosporium apollinis W97_01044 I 0.000
X797_006944 Metarhizium robertsii X797_006944 I 0.000
Z519_06848 Cladophialophora bantiana Z519_06848 I 0.000