GRMZM2G143046 (Zea mays)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 GRMZM2G143046 T272071_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
MYB108
M07065_2.00 		Arabidopsis thaliana
RCCWAAYYNNNNHNH
DNDNNNNRRTTWGGY		 Dap-seq
OMalley et al.(2016)
BOS1_col_a 		0.779 0.817
MYB62
M07027_2.00 		Arabidopsis thaliana
NHRCCTAAYTWNHNN
NNDNWARTTAGGYDN		 Dap-seq
OMalley et al.(2016)
MYB62_col_a 		0.756 0.796
MYB62
M07028_2.00 		Arabidopsis thaliana
HNKRCCTAACTHH
DDAGTTAGGYMND		 Dap-seq
OMalley et al.(2016)
MYB62_colamp_a 		0.756 0.796
MYB116
M07014_2.00 		Arabidopsis thaliana
NRCCTAAYTWNWNNN
NNNWNWARTTAGGYN		 Dap-seq
OMalley et al.(2016)
MYB116_col_a 		0.711 0.742
MYB116
M07015_2.00 		Arabidopsis thaliana
HNTRCCTAACTHH
DDAGTTAGGYAND		 Dap-seq
OMalley et al.(2016)
MYB116_colamp_a 		0.711 0.742
MYB05_ANTMA
M11067_2.00 		Antirrhinum majus Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$MYB305_Q3 		0.693 0.774
MYB57
M01072_2.00 		Arabidopsis thaliana
RCCTAAYT
ARTTAGGY		 PBM
Sullivan et al.(2014)
pTH9748 		0.688 0.710
MYB57
M07059_2.00 		Arabidopsis thaliana
YNTACCTAACTHHH
DDDAGTTAGGTANR		 Dap-seq
OMalley et al.(2016)
MYB57_col_a 		0.688 0.710
MYB57
M07060_2.00 		Arabidopsis thaliana
ACCTAAY
RTTAGGT		 Dap-seq
OMalley et al.(2016)
MYB57_colamp_a 		0.688 0.710
MYB24
M02311_2.00 		Arabidopsis thaliana
RCCDAMYNN
NNRKTHGGY		 PBM
Weirauch et al.(2014)
pTH8662 		0.669 0.742
Q2TCH0_PETHY
M11072_2.00 		Petunia x hybrida Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$PH4_01 		0.668 0.645
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GRMZM2G143046_P01 Myb 57 104
GRMZM2G143046_P01 Myb 110 155
GRMZM2G143046_P02 Myb 42 89
GRMZM2G143046_P02 Myb 95 140

Links

Other Myb/SANT family TFs
Other Zea mays TFs

557 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
A1O3_01201 Capronia epimyces A1O3_01201 I
A1O9_07137 Exophiala aquamarina A1O9_07137 I
CADAFLAG00004268 Aspergillus flavus CADAFLAG00004268 N
CADANGAG00001595 Aspergillus niger CADANGAG00001595 N
CPC735_042510 Coccidioides posadasii CPC735_042510 N
fgenesh1_pm.00866_#_40 Aspergillus carbonarius fgenesh1_pm.00866_#_40 N
PMAA_011030 Talaromyces marneffei PMAA_011030 I
PMAA_011030 Penicillium marneffei PMAA_011030 I
PV08_03176 Exophiala spinifera PV08_03176 I
PV09_00512 Verruconis gallopava PV09_00512 I
TSTA_006150 Talaromyces stipitatus TSTA_006150 I