GRMZM2G170148 (Zea mays)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 GRMZM2G170148 T272106_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PK02532.1
M02347_2.00 		Cannabis sativa
WAATATCTN
NAGATATTW		 PBM
Weirauch et al.(2014)
pTH9579 		0.891 0.978
RVE8
M01074_2.00 		Arabidopsis thaliana
NNNRWATCNN
NNGATWYNNN		 PBM
Sullivan et al.(2014)
pTH7136 		0.883 0.935
RVE8
M07069_2.00 		Arabidopsis thaliana
NHNWAAATATCT
AGATATTTWNDN		 Dap-seq
OMalley et al.(2016)
At3g09600_col_a 		0.883 0.935
RVE8
M07070_2.00 		Arabidopsis thaliana
NNWAAATATCT
AGATATTTWNN		 Dap-seq
OMalley et al.(2016)
At3g09600_colamp_a 		0.883 0.935
RVE4
M07117_2.00 		Arabidopsis thaliana
NNWAAATATCT
AGATATTTWNN		 Dap-seq
OMalley et al.(2016)
LCL1_colamp_a 		0.883 0.935
RVE4
M07118_2.00 		Arabidopsis thaliana
NAAAATATCT
AGATATTTTN		 Dap-seq
OMalley et al.(2016)
LCL1_col 		0.883 0.935
RVE6
M01081_2.00 		Arabidopsis thaliana
AATATCTD
HAGATATT		 PBM
Sullivan et al.(2014)
pTH7151 		0.881 0.957
RVE6
M07138_2.00 		Arabidopsis thaliana
NNAAAATATCT
AGATATTTTNN		 Dap-seq
OMalley et al.(2016)
At5g52660_col_a 		0.881 0.957
RVE6
M07139_2.00 		Arabidopsis thaliana
NNNWAAATATCT
AGATATTTWNNN		 Dap-seq
OMalley et al.(2016)
At5g52660_colamp_a 		0.881 0.957
mybG
M02319_2.00 		Dictyostelium discoideum
WAATATCT
AGATATTW		 PBM
Weirauch et al.(2014)
pTH5362 		0.800 0.848
RVE5
M01079_2.00 		Arabidopsis thaliana
NWAATATCHN
NDGATATTWN		 PBM
Sullivan et al.(2014)
pTH7138 		0.785 0.870
RVE5
M07100_2.00 		Arabidopsis thaliana
NNAAAATATCT
AGATATTTTNN		 Dap-seq
OMalley et al.(2016)
At4g01280_col_a 		0.785 0.870
RVE5
M07101_2.00 		Arabidopsis thaliana
NNWAAATATCT
AGATATTTWNN		 Dap-seq
OMalley et al.(2016)
At4g01280_colamp_a 		0.785 0.870
PK08316.1
M02350_2.00 		Cannabis sativa
NNNRWATCNN
NNGATWYNNN		 PBM
Weirauch et al.(2014)
pTH9488 		0.706 0.696
RVE1
M00879_2.00 		Arabidopsis thaliana
AAATATCT
AGATATTT		 PBM
Franco-Zorrilla et al.(2014)
RVE1 		0.670 0.652
RVE1
M07128_2.00 		Arabidopsis thaliana
NNNWAAATATCTNN
NNAGATATTTWNNN		 Dap-seq
OMalley et al.(2016)
RVE1_col_a 		0.670 0.652
RVE1
M07129_2.00 		Arabidopsis thaliana
NNWAATATCW
WGATATTWNN		 Dap-seq
OMalley et al.(2016)
RVE1_colamp_a 		0.670 0.652
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GRMZM2G170148_P01 Myb 79 124

Links

Other Myb/SANT family TFs
Other Zea mays TFs

328 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSAMEG00000013989 Ailuropoda melanoleuca ENSAMEG00000013989 N
ENSCPOG00000008991 Cavia porcellus ENSCPOG00000008991 N
ENSCSAG00000017237 Chlorocebus sabaeus ENSCSAG00000017237 N
ENSMICG00000015919 Microcebus murinus ENSMICG00000015919 N
ENSMPUG00000015626 Mustela putorius furo ENSMPUG00000015626 N
ENSNLEG00000011329 Nomascus leucogenys ENSNLEG00000011329 N
ENSOARG00000013148 Ovis aries ENSOARG00000013148 N
ENSP00000325123 Macaca fascicularis ENSP00000325123 N
ENSP00000325123-D1 Bos grunniens ENSP00000325123-D1 N
ENSPANG00000000536 Papio anubis ENSPANG00000000536 N
ENSPPYG00000006877 Pongo abelii ENSPPYG00000006877 N
ENSSHAG00000015790 Sarcophilus harrisii ENSSHAG00000015790 N
ENSSTOG00000001741 Ictidomys tridecemlineatus ENSSTOG00000001741 N
ENSTSYG00000009785 Tarsius syrichta ENSTSYG00000009785 N
Myotis_brandtii_ZSCAN2_10013218 Myotis brandtii Myotis_brandtii_ZSCAN2_10013218 N
ZSCAN2 Erinaceus europaeus ENSEEUG00000006493 N
ZSCAN2 Bos taurus ENSBTAG00000001385 N
ZSCAN2 Canis familiaris ENSCAFG00000012858 N
ZSCAN2 Choloepus hoffmanni ENSCHOG00000006276 N
ZSCAN2 Callithrix jacchus ENSCJAG00000016119 N
ZSCAN2 Dasypus novemcinctus ENSDNOG00000033566 N
ZSCAN2 Equus caballus ENSECAG00000022470 N
ZSCAN2 Sorex araneus ENSSARG00000014372 N
Zscan2 Rattus norvegicus ENSRNOG00000022164 N
ZSCAN2 Pan troglodytes ENSPTRG00000007400 N
ZSCAN2 Macaca mulatta ENSMMUG00000022080 N
ZSCAN2 Felis catus ENSFCAG00000025011 N
ZSCAN2 Ochotona princeps ENSOPRG00000002700 N
ZSCAN2 Otolemur garnettii ENSOGAG00000007268 N
ZSCAN2 Oryctolagus cuniculus ENSOCUG00000007308 N
ZSCAN2 Homo sapiens ENSG00000176371 N
ZSCAN2 Gorilla gorilla ENSGGOG00000014609 N
ZSCAN2 Loxodonta africana ENSLAFG00000001521 N
ZSCAN2 Monodelphis domestica ENSMODG00000019354 N