CIS-BP Database: Catalog of Inferred Sequence Binding Preferences

TF Information

GSMUA_Achr11G01420_001 *(Musa acuminata)* Myb/SANT
Pfam ID	Interpro ID	Gene ID	CIS-BP ID	Sequence source	Animal TF db
PF00249 (Myb_DNA-binding)	IPR014778	GSMUA_Achr11G01420_001	T272273_2.00	Ensembl (2018-Dec-8)	Link out
Directly determined binding motifs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No direct experiments
Motifs from related TFs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
PK08316.1 M02350_2.00	Cannabis sativa	NNNRWATCNN	NNGATWYNNN	PBM Weirauch et al.(2014) pTH9488	0.859	0.870
RVE1 M00879_2.00	Arabidopsis thaliana	AAATATCT	AGATATTT	PBM Franco-Zorrilla et al.(2014) RVE1	0.799	0.848
RVE1 M07128_2.00	Arabidopsis thaliana	NNNWAAATATCTNN	NNAGATATTTWNNN	Dap-seq OMalley et al.(2016) RVE1_col_a	0.799	0.848
RVE1 M07129_2.00	Arabidopsis thaliana	NNWAATATCW	WGATATTWNN	Dap-seq OMalley et al.(2016) RVE1_colamp_a	0.799	0.848
LHY M06997_2.00	Arabidopsis thaliana	NWAAATATCT	AGATATTTWN	Dap-seq OMalley et al.(2016) LHY1_col_a	0.798	0.870
LHY M06998_2.00	Arabidopsis thaliana	NNWAAATATCT	AGATATTTWNN	Dap-seq OMalley et al.(2016) LHY1_colamp_a	0.798	0.870
RVE7 M01069_2.00	Arabidopsis thaliana	NDHRWATCNN	NNGATWYDHN	PBM Sullivan et al.(2014) pTH7081	0.795	0.826
RVE7 M02286_2.00	Arabidopsis thaliana	NDARTATCH	DGATAYTHN	PBM Weirauch et al.(2014) pTH7277	0.795	0.826
RVE7L M07071_2.00	Arabidopsis thaliana	NNNNWAAATATCWNN	NNWGATATTTWNNNN	Dap-seq OMalley et al.(2016) AT3G10113_col_a	0.795	0.826
RVE7 M07008_2.00	Arabidopsis thaliana	NNWAAATATCT	AGATATTTWNN	Dap-seq OMalley et al.(2016) EPR1_colamp_a	0.795	0.826
RVE7 M07009_2.00	Arabidopsis thaliana	NWAAATATCTHN	NDAGATATTTWN	Dap-seq OMalley et al.(2016) EPR1_col	0.795	0.826
OS08G0157600 M02330_2.00	Oryza sativa	DNRTATCHN	NDGATAYNH	PBM Weirauch et al.(2014) pTH7793	0.788	0.848
CCA1 M00875_2.00	Arabidopsis thaliana	NDNRWATCN	NGATWYNHN	PBM Franco-Zorrilla et al.(2014) CCA1	0.743	0.804
CCA1 M11039_2.00	Arabidopsis thaliana	Transfac license required	Transfac license required	Transfac Matys et al.(2006) P$CCA1_Q5	0.743	0.804
RVE6 M01081_2.00	Arabidopsis thaliana	AATATCTD	HAGATATT	PBM Sullivan et al.(2014) pTH7151	0.699	0.696
RVE6 M07138_2.00	Arabidopsis thaliana	NNAAAATATCT	AGATATTTTNN	Dap-seq OMalley et al.(2016) At5g52660_col_a	0.699	0.696
RVE6 M07139_2.00	Arabidopsis thaliana	NNNWAAATATCT	AGATATTTWNNN	Dap-seq OMalley et al.(2016) At5g52660_colamp_a	0.699	0.696
RVE5 M01079_2.00	Arabidopsis thaliana	NWAATATCHN	NDGATATTWN	PBM Sullivan et al.(2014) pTH7138	0.696	0.652
RVE5 M07100_2.00	Arabidopsis thaliana	NNAAAATATCT	AGATATTTTNN	Dap-seq OMalley et al.(2016) At4g01280_col_a	0.696	0.652
RVE5 M07101_2.00	Arabidopsis thaliana	NNWAAATATCT	AGATATTTWNN	Dap-seq OMalley et al.(2016) At4g01280_colamp_a	0.696	0.652
RVE8 M01074_2.00	Arabidopsis thaliana	NNNRWATCNN	NNGATWYNNN	PBM Sullivan et al.(2014) pTH7136	0.689	0.696
RVE8 M07069_2.00	Arabidopsis thaliana	NHNWAAATATCT	AGATATTTWNDN	Dap-seq OMalley et al.(2016) At3g09600_col_a	0.689	0.696
RVE8 M07070_2.00	Arabidopsis thaliana	NNWAAATATCT	AGATATTTWNN	Dap-seq OMalley et al.(2016) At3g09600_colamp_a	0.689	0.696
PK02532.1 M02347_2.00	Cannabis sativa	WAATATCTN	NAGATATTW	PBM Weirauch et al.(2014) pTH9579	0.689	0.674
RVE4 M07117_2.00	Arabidopsis thaliana	NNWAAATATCT	AGATATTTWNN	Dap-seq OMalley et al.(2016) LCL1_colamp_a	0.689	0.674
RVE4 M07118_2.00	Arabidopsis thaliana	NAAAATATCT	AGATATTTTN	Dap-seq OMalley et al.(2016) LCL1_col	0.689	0.674
For this family, TFs with SR scores > 0.661* will likely have a similar motif*

DNA Binding Domains

Protein ID	Domain	From	To	Sequence
GSMUA_Achr11P01420_001	Myb	71	116	REKWTEEEHSKFLEALQLYGRAWRRIEEHIGTKTAVQIRSHAQKFF

Links
Other Myb/SANT family TFs
Other *Musa acuminata* TFs

459 Related TFs

Name	Species	Gene ID	Motif Evidence	SR Score	Action
A1O5_05375	Cladophialophora psammophila	A1O5_05375	N
A1Q1_01025	Trichosporon asahii	A1Q1_01025	N
ANIA_00094	Aspergillus nidulans	CADANIAG00002656	N
AUEXF2481DRAFT_41260	Aureobasidium subglaciale	AUEXF2481DRAFT_41260	N
CGGC5_10999	Colletotrichum gloeosporioides	CGGC5_10999	N
CH063_11411	Colletotrichum higginsianum	CH063_11411	N
Cob_00662	Colletotrichum orbiculare	Cob_00662	N
CSUB01_08092	Colletotrichum sublineola	CSUB01_08092	N
e_gw1.9.18.1	Nectria haematococca	e_gw1.9.18.1	N
F503_06049	Ophiostoma piceae uamh	F503_06049	I
GGTG_12739	Gaeumannomyces graminis	GGTG_12739	N
GMDG_04760	Pseudogymnoascus destructans	GMDG_04760	I
M437DRAFT_57903	Aureobasidium melanogenum	M437DRAFT_57903	N
M438DRAFT_314995	Aureobasidium pullulans	M438DRAFT_314995	N
NechaG45265	Fusarium solani	NechaG45265	N
VDAG_07398	Verticillium dahliae	VDAG_07398	N
VDBG_09240	Verticillium alfalfae	VDBG_09240	N
VDBG_09240	Verticillium albo atrum	VDBG_09240	N
Z519_08249	Cladophialophora bantiana	Z519_08249	N

GSMUA_Achr11G01420_001 (Musa acuminata) Myb/SANT

TF Information

Directly determined binding motifs

Motifs from related TFs

DNA Binding Domains

Links

459 Related TFs

GSMUA_Achr11G01420_001 **(Musa acuminata)
Myb/SANT**