GSMUA_Achr3G08370_001 (Musa acuminata)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 GSMUA_Achr3G08370_001 T272383_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
MYB108
M07065_2.00 		Arabidopsis thaliana
RCCWAAYYNNNNHNH
DNDNNNNRRTTWGGY		 Dap-seq
OMalley et al.(2016)
BOS1_col_a 		0.785 0.839
MYB62
M07027_2.00 		Arabidopsis thaliana
NHRCCTAAYTWNHNN
NNDNWARTTAGGYDN		 Dap-seq
OMalley et al.(2016)
MYB62_col_a 		0.753 0.774
MYB62
M07028_2.00 		Arabidopsis thaliana
HNKRCCTAACTHH
DDAGTTAGGYMND		 Dap-seq
OMalley et al.(2016)
MYB62_colamp_a 		0.753 0.774
MYB05_ANTMA
M11067_2.00 		Antirrhinum majus Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$MYB305_Q3 		0.719 0.817
MYB116
M07014_2.00 		Arabidopsis thaliana
NRCCTAAYTWNWNNN
NNNWNWARTTAGGYN		 Dap-seq
OMalley et al.(2016)
MYB116_col_a 		0.711 0.731
MYB116
M07015_2.00 		Arabidopsis thaliana
HNTRCCTAACTHH
DDAGTTAGGYAND		 Dap-seq
OMalley et al.(2016)
MYB116_colamp_a 		0.711 0.731
Q2TCH0_PETHY
M11072_2.00 		Petunia x hybrida Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$PH4_01 		0.699 0.667
MYB24
M02311_2.00 		Arabidopsis thaliana
RCCDAMYNN
NNRKTHGGY		 PBM
Weirauch et al.(2014)
pTH8662 		0.694 0.785
MYB57
M01072_2.00 		Arabidopsis thaliana
RCCTAAYT
ARTTAGGY		 PBM
Sullivan et al.(2014)
pTH9748 		0.687 0.753
MYB57
M07059_2.00 		Arabidopsis thaliana
YNTACCTAACTHHH
DDDAGTTAGGTANR		 Dap-seq
OMalley et al.(2016)
MYB57_col_a 		0.687 0.753
MYB57
M07060_2.00 		Arabidopsis thaliana
ACCTAAY
RTTAGGT		 Dap-seq
OMalley et al.(2016)
MYB57_colamp_a 		0.687 0.753
ATMYB121
M07091_2.00 		Arabidopsis thaliana
NYNWACCTAMYHHH
DDDRKTAGGTWNRN		 Dap-seq
OMalley et al.(2016)
MYB121_col_a 		0.667 0.688
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GSMUA_Achr3P08370_001 Myb 23 70
GSMUA_Achr3P08370_001 Myb 76 121

Links

Other Myb/SANT family TFs
Other Musa acuminata TFs

726 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AMEM010415 Anopheles merus AMEM010415 I
AWRI1499_3461 Brettanomyces bruxellensis AWRI1499_3461 I
CAGL0L07436g Candida glabrata CAGL0L07436g I
CANTEDRAFT_129585 Candida tenuis CANTEDRAFT_129585 I
CaO19.11483 Candida albicans CaO19.11483 I
CaO19.4000 Candida albicans CaO19.4000 D
CD36_54680 Candida dubliniensis CD36_54680 I
CLUG_01830 Candida lusitaniae CLUG_01830 I
CLUG_01830 Clavispora lusitaniae CLUG_01830 I
CPAG_03842 Candida parapsilosis CPAG_03842 I
CTRG_06116 Candida tropicalis CTRG_06116 I
EBI_21706 Enterocytozoon bieneusi EBI_21706 I
fgenesh1_pm.C_chr_2.1000191 Pichia stipitis fgenesh1_pm.C_chr_2.1000191 I
G210_1625 Candida maltosa G210_1625 I
HPODL_05037 Ogataea parapolymorpha HPODL_05037 N
JL09_g3549 Pichia kudriavzevii JL09_g3549 I
KAFR_0A06770 Kazachstania africana KAFR_0A06770 I
KLTH0F09636g Lachancea thermotolerans KLTH0F09636g I
KLTH0F09636g Kluyveromyces thermotolerans KLTH0F09636g I
Kwal_3494 Kluyveromyces waltii Kwal_3494 I
LALA0_S03e04016g Lachancea lanzarotensis LALA0_S03e04016g I
LELG_04000 Lodderomyces elongisporus LELG_04000 I
NDAI_0B03290 Naumovozyma dairenensis NDAI_0B03290 I
PAS_chr2-2_0043 Komagataella pastoris PAS_chr2-2_0043 N
PFL1_02807 Pseudozyma flocculosa PFL1_02807 I
PGUG_02484 Candida guilliermondii PGUG_02484 I
PGUG_02484 Meyerozyma guilliermondii PGUG_02484 I
PHSY_003535 Pseudozyma hubeiensis PHSY_003535 I
PICST_34942 Scheffersomyces stipitis PICST_34942 I
PSEUBRA_SCAF12g01810 Pseudozyma brasiliensis PSEUBRA_SCAF12g01810 I
SAKL0E06402g Lachancea kluyveri SAKL0E06402g I
sr15806 Sporisorium reilianum sr15806 I
UHOR_07039 Ustilago hordei UHOR_07039 I
UM04928 Ustilago maydis UM04928 D
XP_002492171.1 Pichia pastoris XP_002492171.1 N