CIS-BP Database: Catalog of Inferred Sequence Binding Preferences

TF Information

GSMUA_AchrUn_randomG02890_001 *(Musa acuminata)* Myb/SANT
Pfam ID	Interpro ID	Gene ID	CIS-BP ID	Sequence source	Animal TF db
PF00249 (Myb_DNA-binding)	IPR014778	GSMUA_AchrUn_randomG02890_001	T272703_2.00	Ensembl (2018-Dec-8)	Link out
Directly determined binding motifs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No direct experiments
Motifs from related TFs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
MYB107 M07061_2.00	Arabidopsis thaliana	NDDWDBBYYACCWAMYHH	DDRKTWGGTRRVVHWHHN	Dap-seq OMalley et al.(2016) MYB107_col_a	0.756	0.774
MYB107 M07062_2.00	Arabidopsis thaliana	WNBYYYACCWAMYH	DRKTWGGTRRRVNW	Dap-seq OMalley et al.(2016) MYB107_colamp_a	0.756	0.774
MYB92 M07123_2.00	Arabidopsis thaliana	NHHACCTAMY	RKTAGGTDDN	Dap-seq OMalley et al.(2016) MYB92_100ng20cy_b	0.749	0.753
MYB92 M07124_2.00	Arabidopsis thaliana	NNNNWNNYYYACCWAMYHH	DDRKTWGGTRRRNNWNNNN	Dap-seq OMalley et al.(2016) MYB92_colamp_a	0.749	0.753
MYB106 M11040_2.00	Arabidopsis thaliana	Transfac license required	Transfac license required	Transfac Matys et al.(2006) P$AT3G01140_01	0.723	0.720
AtMYB17 M07099_2.00	Arabidopsis thaliana	YYYACCWACCWHHHH	DDDDWGGTWGGTRRR	Dap-seq OMalley et al.(2016) MYB17_colamp_a	0.708	0.720
AtMYB93 M07020_2.00	Arabidopsis thaliana	HDNYYYAMCWAMYHHHHHHHH	DDDDDDDDRKTWGKTRRRNHD	Dap-seq OMalley et al.(2016) MYB93_col_a	0.706	0.742
AtMYB93 M07021_2.00	Arabidopsis thaliana	NNHNBYYYAMCWAMY	RKTWGKTRRRVNDNN	Dap-seq OMalley et al.(2016) MYB93_colamp_a	0.706	0.742
MYB55 M00876_2.00	Arabidopsis thaliana	ACCWAMCD	HGKTWGGT	PBM Franco-Zorrilla et al.(2014) MYB55	0.680	0.667
MYB55 M07102_2.00	Arabidopsis thaliana	HNNNHBYAMCWAMCD	HGKTWGKTRVDNNND	Dap-seq OMalley et al.(2016) MYB55_colamp_a	0.680	0.667
MYB55 M07103_2.00	Arabidopsis thaliana	NYNYAMCHACCRHH	DDYGGTDGKTRNRN	Dap-seq OMalley et al.(2016) MYB55_col	0.680	0.667
Q2TCH0_PETHY M11072_2.00	Petunia x hybrida	Transfac license required	Transfac license required	Transfac Matys et al.(2006) P$PH4_01	0.669	0.688
MYB58 M07005_2.00	Arabidopsis thaliana	NNYYYACCWAMCHHH	DDDGKTWGGTRRRNN	Dap-seq OMalley et al.(2016) MYB58_col_a	0.667	0.699
MYB58 M07006_2.00	Arabidopsis thaliana	HNNYHYACCWAMCHHHNNNNH	DNNNNDDDGKTWGGTRDRNND	Dap-seq OMalley et al.(2016) MYB58_colamp_a	0.667	0.699
MYB3 M02288_2.00	Arabidopsis thaliana	NNYACCTACCN	NGGTAGGTRNN	PBM Weirauch et al.(2014) pTH7125	0.663	0.742
AtMYB10 M07081_2.00	Arabidopsis thaliana	YYYACCWAMCHHHHNH	DNDDDDGKTWGGTRRR	Dap-seq OMalley et al.(2016) MYB10_col_a	0.661	0.720
AtMYB10 M07082_2.00	Arabidopsis thaliana	NYYYACCWAMCHHH	DDDGKTWGGTRRRN	Dap-seq OMalley et al.(2016) MYB10_colamp_a	0.661	0.720
For this family, TFs with SR scores > 0.661* will likely have a similar motif*

DNA Binding Domains

Protein ID	Domain	From	To	Sequence
GSMUA_AchrUn_randomP02890_001	Myb	14	61	RGPWTPEEDKKLRDYVQKNGHGSWRRLPMLAGLNRCGKSCRLRWINYL
GSMUA_AchrUn_randomP02890_001	Myb	67	112	RGNFTEEEESLIIDLHSLHGNKWSTIAASLPGRTDNEIKNYWNTHL

Links
Other Myb/SANT family TFs
Other *Musa acuminata* TFs

841 Related TFs

Name	Species	Gene ID	Motif Evidence	SR Score	Action
Hsal_17691--NA	Harpegnathos saltator	Hsal_17691--NA	N
SVUK_0001259001	Strongylus vulgaris	SVUK_0001259001	N

GSMUA_AchrUn_randomG02890_001 (Musa acuminata) Myb/SANT

TF Information

Directly determined binding motifs

Motifs from related TFs

DNA Binding Domains

Links

841 Related TFs

GSMUA_AchrUn_randomG02890_001 **(Musa acuminata)
Myb/SANT**