MTR_5g007370 (Medicago truncatula)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 MTR_5g007370 T274840_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AtMYB17
M07099_2.00 		Arabidopsis thaliana
YYYACCWACCWHHHH
DDDDWGGTWGGTRRR		 Dap-seq
OMalley et al.(2016)
MYB17_colamp_a 		0.760 0.763
MYB92
M07123_2.00 		Arabidopsis thaliana
NHHACCTAMY
RKTAGGTDDN		 Dap-seq
OMalley et al.(2016)
MYB92_100ng20cy_b 		0.735 0.796
MYB92
M07124_2.00 		Arabidopsis thaliana
NNNNWNNYYYACCWAMYHH
DDRKTWGGTRRRNNWNNNN		 Dap-seq
OMalley et al.(2016)
MYB92_colamp_a 		0.735 0.796
MYB107
M07061_2.00 		Arabidopsis thaliana
NDDWDBBYYACCWAMYHH
DDRKTWGGTRRVVHWHHN		 Dap-seq
OMalley et al.(2016)
MYB107_col_a 		0.733 0.796
MYB107
M07062_2.00 		Arabidopsis thaliana
WNBYYYACCWAMYH
DRKTWGGTRRRVNW		 Dap-seq
OMalley et al.(2016)
MYB107_colamp_a 		0.733 0.796
AtMYB93
M07020_2.00 		Arabidopsis thaliana
HDNYYYAMCWAMYHHHHHHHH
DDDDDDDDRKTWGKTRRRNHD		 Dap-seq
OMalley et al.(2016)
MYB93_col_a 		0.710 0.828
AtMYB93
M07021_2.00 		Arabidopsis thaliana
NNHNBYYYAMCWAMY
RKTWGKTRRRVNDNN		 Dap-seq
OMalley et al.(2016)
MYB93_colamp_a 		0.710 0.828
MYB106
M11040_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$AT3G01140_01 		0.689 0.731
MYB55
M00876_2.00 		Arabidopsis thaliana
ACCWAMCD
HGKTWGGT		 PBM
Franco-Zorrilla et al.(2014)
MYB55 		0.677 0.699
MYB55
M07102_2.00 		Arabidopsis thaliana
HNNNHBYAMCWAMCD
HGKTWGKTRVDNNND		 Dap-seq
OMalley et al.(2016)
MYB55_colamp_a 		0.677 0.699
MYB55
M07103_2.00 		Arabidopsis thaliana
NYNYAMCHACCRHH
DDYGGTDGKTRNRN		 Dap-seq
OMalley et al.(2016)
MYB55_col 		0.677 0.699
MYB61
M07002_2.00 		Arabidopsis thaliana
HNYAMCHACCDNHNH
DNDNHGGTDGKTRND		 Dap-seq
OMalley et al.(2016)
MYB61_col_a 		0.664 0.710
MYB61
M07003_2.00 		Arabidopsis thaliana
NHNYACCWAMCDH
DHGKTWGGTRNDN		 Dap-seq
OMalley et al.(2016)
MYB61_colamp_a 		0.664 0.710
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
AES93776 Myb 14 61
AES93776 Myb 67 112

Links

Other Myb/SANT family TFs
Other Medicago truncatula TFs

644 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BGIOSGA000921 Oryza indica BGIOSGA000921 I
BGIOSGA020266 Oryza indica BGIOSGA020266 I
BRADI2G18530 Brachypodium distachyon BRADI2G18530 I
Ciclev10026733m.g Citrus clementina Ciclev10026733m.g I
F775_44085 Aegilops tauschii F775_44085 I
F775_52480 Aegilops tauschii F775_52480 I
GRMZM2G101405 Zea mays GRMZM2G101405 I
GRMZM2G137802 Zea mays GRMZM2G137802 I
GRMZM5G863420 Zea mays GRMZM5G863420 I
GSMUA_Achr3G20450_001 Musa acuminata GSMUA_Achr3G20450_001 I
GSMUA_Achr7G09680_001 Musa acuminata GSMUA_Achr7G09680_001 I
LPERR01G24650 Leersia perrieri LPERR01G24650 I
LPERR05G19900 Leersia perrieri LPERR05G19900 I
MLOC_10264 Hordeum vulgare MLOC_10264 I
MLOC_81131 Hordeum vulgare MLOC_81131 I
OB01G37710 Oryza brachyantha OB01G37710 I
OB05G31630 Oryza brachyantha OB05G31630 I
OBART01G28750 Oryza barthii OBART01G28750 I
OBART01G28780 Oryza barthii OBART01G28780 I
OBART05G24090 Oryza barthii OBART05G24090 I
OGLUM01G32750 Oryza glumaepatula OGLUM01G32750 I
OMERI01G26280 Oryza meridionalis OMERI01G26280 I
OMERI01G26720 Oryza meridionalis OMERI01G26720 I
ONIVA01G32840 Oryza nivara ONIVA01G32840 N
ONIVA05G24830 Oryza nivara ONIVA05G24830 I
OPUNC01G28510 Oryza punctata OPUNC01G28510 I
OPUNC05G21470 Oryza punctata OPUNC05G21470 I
orange1.1g029257m.g Citrus sinensis orange1.1g029257m.g I
ORGLA01G0238400 Oryza glaberrima ORGLA01G0238400 I
ORUFI01G31840 Oryza rufipogon ORUFI01G31840 I
ORUFI05G25660 Oryza rufipogon ORUFI05G25660 I
OS01G0714800 Oryza sativa OS01G0714800 I
OS05G0537100 Oryza sativa OS05G0537100 I
Pavir.Ca01747 Panicum virgatum Pavir.Ca01747 I
Pavir.Ea02619 Panicum virgatum Pavir.Ea02619 I
Pavir.Eb02766 Panicum virgatum Pavir.Eb02766 I
Pavir.J03284 Panicum virgatum Pavir.J03284 I
Sb03g032800 Sorghum bicolor Sb03g032800 I
Sb09g026830 Sorghum bicolor Sb09g026830 I
Si004464m.g Setaria italica Si004464m.g I
Si023194m.g Setaria italica Si023194m.g I
TRAES3BF111700140CFD_g Triticum aestivum TRAES3BF111700140CFD_g I
Traes_1AL_9ADA7A031 Triticum aestivum Traes_1AL_9ADA7A031 I
Traes_1DL_D550418641 Triticum aestivum Traes_1DL_D550418641 I
Traes_3DL_DF0D3F3FE Triticum aestivum Traes_3DL_DF0D3F3FE I
TRIUR3_01979 Triticum urartu TRIUR3_01979 I
TRIUR3_33662 Triticum urartu TRIUR3_33662 I