CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
ONIVA01G42920
(
Oryza nivara
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00249 (Myb_DNA-binding)
IPR014778
ONIVA01G42920
T276212_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ONIVA01G42920.1
Myb
15
64
RRPWSKVEDKVFESALVLCPEDVPDRWALVAAQLPGRTPQEALEHYQVLV
ONIVA01G42920.1
Myb
104
151
GVPWSEDEHRLFLEGLDRYGRGDWRNISRFSVRTRTPTQVASHAQKYF
Links
Other
Myb/SANT
family TFs
Other
Oryza nivara
TFs
34 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BGIOSGA004852
Oryza indica
BGIOSGA004852
N
0.909
BGIOSGA017964
Oryza indica
BGIOSGA017964
N
0.729
BGIOSGA017965
Oryza indica
BGIOSGA017965
N
0.717
BRADI2G55797
Brachypodium distachyon
BRADI2G55797
N
0.736
F775_31610
Aegilops tauschii
F775_31610
N
0.692
GRMZM2G027914
Zea mays
GRMZM2G027914
N
0.682
GRMZM2G091201
Zea mays
GRMZM2G091201
N
0.738
GRMZM2G143640
Zea mays
GRMZM2G143640
N
0.703
LPERR01G32800
Leersia perrieri
LPERR01G32800
N
0.734
LPERR05G14380
Leersia perrieri
LPERR05G14380
N
0.733
MDP0000289018
Malus domestica
MDP0000289018
I
0.667
OBART01G38220
Oryza barthii
OBART01G38220
N
0.879
OGLUM01G42400
Oryza glumaepatula
OGLUM01G42400
N
0.879
OGLUM05G19230
Oryza glumaepatula
OGLUM05G19230
N
0.717
OGLUM05G19240
Oryza glumaepatula
OGLUM05G19240
N
0.729
OMERI01G35110
Oryza meridionalis
OMERI01G35110
N
0.909
ONIVA05G19090
Oryza nivara
ONIVA05G19090
N
0.717
OPUNC01G36990
Oryza punctata
OPUNC01G36990
N
0.909
OPUNC05G16000
Oryza punctata
OPUNC05G16000
N
0.738
ORGLA01G0320500
Oryza glaberrima
ORGLA01G0320500
N
0.879
ORGLA05G0157700
Oryza glaberrima
ORGLA05G0157700
N
0.729
ORUFI01G41590
Oryza rufipogon
ORUFI01G41590
N
0.909
ORUFI05G19330
Oryza rufipogon
ORUFI05G19330
N
0.717
ORUFI05G19340
Oryza rufipogon
ORUFI05G19340
N
0.729
OS01G0863300
Oryza sativa
OS01G0863300
N
0.909
OS05G0442400
Oryza sativa
OS05G0442400
N
0.729
Pavir.Ea03744
Panicum virgatum
Pavir.Ea03744
N
0.725
Pavir.J02275
Panicum virgatum
Pavir.J02275
N
0.725
Pavir.J08778
Panicum virgatum
Pavir.J08778
N
0.723
Sb03g040730
Sorghum bicolor
Sb03g040730
N
0.696
Sb09g021770
Sorghum bicolor
Sb09g021770
N
0.714
Si003047m.g
Setaria italica
Si003047m.g
N
0.735
Si023363m.g
Setaria italica
Si023363m.g
N
0.732
TRAES3BF019300020CFD_g
Triticum aestivum
TRAES3BF019300020CFD_g
N
0.692