CIS-BP Database: Catalog of Inferred Sequence Binding Preferences

TF Information

ORGLA07G0180600 *(Oryza glaberrima)* Myb/SANT
Pfam ID	Interpro ID	Gene ID	CIS-BP ID	Sequence source	Animal TF db
PF00249 (Myb_DNA-binding)	IPR014778	ORGLA07G0180600	T276785_2.00	Ensembl (2018-Dec-8)	Link out
Directly determined binding motifs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No direct experiments
Motifs from related TFs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
MYB96 M07153_2.00	Arabidopsis thaliana	HHHHHYHHCCAACYAHYWNHN	NDNWRDTRGTTGGDDRDDDDD	Dap-seq OMalley et al.(2016) MYB96_colamp_a	0.808	0.903
MYB96 M07154_2.00	Arabidopsis thaliana	YAMCHNCCAMCHAHHHHH	DDDDDTDGKTGGNDGKTR	Dap-seq OMalley et al.(2016) MYB96_col_b	0.808	0.903
MYB94 M02298_2.00	Arabidopsis thaliana	DACCGGTH	DACCGGTH	PBM Weirauch et al.(2014) pTH7085	0.805	0.892
MYB94 M07094_2.00	Arabidopsis thaliana	HHNYHYCAACYACYWHHNN	NNDDWRGTRGTTGRDRNDD	Dap-seq OMalley et al.(2016) MYB94_col_b	0.805	0.892
MYB30 M07089_2.00	Arabidopsis thaliana	NHHHCAACYACYWHH	DDWRGTRGTTGDDDN	Dap-seq OMalley et al.(2016) MYB30_col_a	0.803	0.892
MYB30 M07090_2.00	Arabidopsis thaliana	HHHYYHCCAACYAMY	RKTRGTTGGDRRDDD	Dap-seq OMalley et al.(2016) MYB30_colamp_a	0.803	0.892
MYB60 M07001_2.00	Arabidopsis thaliana	HNNHYYCAACYACYWHHNN	NNDDWRGTRGTTGRRDNND	Dap-seq OMalley et al.(2016) MYB60_col	0.783	0.849
ATY13 M07035_2.00	Arabidopsis thaliana	HAMCHMCCAMCHAHH	DDTDGKTGGKDGKTD	Dap-seq OMalley et al.(2016) ATY13_col_a	0.766	0.860
ATY13 M07036_2.00	Arabidopsis thaliana	HAMCHHCCAACHAHH	DDTDGTTGGDDGKTD	Dap-seq OMalley et al.(2016) ATY13_colamp_a	0.766	0.860
For this family, TFs with SR scores > 0.661* will likely have a similar motif*

DNA Binding Domains

Protein ID	Domain	From	To	Sequence
ORGLA07G0180600.1	Myb	14	61	KGPWTPEEDLVLVSYVQEHGPGNWRAVPTRTGLMRCSKSCRLRWTNYL
ORGLA07G0180600.1	Myb	67	112	RGNFTDQEEKLIVHLQALLGNRWAAIASYLPERTDNDIKNYWNTHL

Links
Other Myb/SANT family TFs
Other *Oryza glaberrima* TFs

311 Related TFs

Name	Species	Gene ID	Motif Evidence	SR Score	Action
GLOINDRAFT_11824	Rhizophagus irregularis	GLOINDRAFT_11824	N	0.000
GLOINDRAFT_13510	Rhizophagus irregularis	GLOINDRAFT_13510	N	0.000
GLOINDRAFT_15572	Rhizophagus irregularis	GLOINDRAFT_15572	N	0.000
GLOINDRAFT_20940	Rhizophagus irregularis	GLOINDRAFT_20940	N	0.000
GLOINDRAFT_21291	Rhizophagus irregularis	GLOINDRAFT_21291	N	0.000
GLOINDRAFT_27042	Rhizophagus irregularis	GLOINDRAFT_27042	N	0.000
GLOINDRAFT_28904	Rhizophagus irregularis	GLOINDRAFT_28904	N	0.000
GLOINDRAFT_31701	Rhizophagus irregularis	GLOINDRAFT_31701	N	0.000
GLOINDRAFT_349586	Rhizophagus irregularis	GLOINDRAFT_349586	N	0.000
GLOINDRAFT_35671	Rhizophagus irregularis	GLOINDRAFT_35671	N	0.000
GLOINDRAFT_5627	Rhizophagus irregularis	GLOINDRAFT_5627	N	0.000
GLOINDRAFT_7438	Rhizophagus irregularis	GLOINDRAFT_7438	N	0.000
GLOINDRAFT_8155	Rhizophagus irregularis	GLOINDRAFT_8155	N	0.000
GLOINDRAFT_9464	Rhizophagus irregularis	GLOINDRAFT_9464	N	0.000
GLOINDRAFT_9465	Rhizophagus irregularis	GLOINDRAFT_9465	N	0.000