ORUFI01G49220 (Oryza rufipogon)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 ORUFI01G49220 T276884_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
MYB59
M00883_2.00 		Arabidopsis thaliana
NKACCTAAYN
NRTTAGGTMN		 PBM
Franco-Zorrilla et al.(2014)
MYB59 		0.753 0.774
MYB27
M07097_2.00 		Arabidopsis thaliana
HHTACCTAAYTTWWN
NWWAARTTAGGTADD		 Dap-seq
OMalley et al.(2016)
MYB27_col_a 		0.682 0.720
MYB27
M07098_2.00 		Arabidopsis thaliana
NYHTACCTAAYTTWHN
NDWAARTTAGGTADRN		 Dap-seq
OMalley et al.(2016)
MYB27_colamp_a 		0.682 0.720
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ORUFI01G49220.1 Myb 58 105
ORUFI01G49220.1 Myb 111 156

Links

Other Myb/SANT family TFs
Other Oryza rufipogon TFs

251 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aquca_019_00196 Aquilegia coerulea Aquca_019_00196 N
Bo3g040310 Brassica oleracea Bo3g040310 N
Bo4g071850 Brassica oleracea Bo4g071850 N
Bo4g165090 Brassica oleracea Bo4g165090 N
Bostr.27991s0112 Boechera stricta Bostr.27991s0112 N
Bra000495 Brassica rapa Bra000495 N
Bra011972 Brassica rapa Bra011972 N
Bra034392 Brassica rapa Bra034392 N
BRADI5G07720 Brachypodium distachyon BRADI5G07720 N
Cagra.12562s0002 Capsella grandiflora Cagra.12562s0002 N
Carubv10023654m.g Capsella rubella Carubv10023654m.g N
cassava28523.m1 Manihot esculenta cassava28523.m1 N
Ca_17453 Cicer arietinum Ca_17453 N
chr3.CM0070.320.nc Lotus japonicus chr3.CM0070.320.nc N
chr3.CM0396.580.nc Lotus japonicus chr3.CM0396.580.nc N
Cla008847 Citrullus lanatus Cla008847 N
Cucsa.385700 Cucumis sativus Cucsa.385700 N
Eucgr.B03931 Eucalyptus grandis Eucgr.B03931 N
evm.TU.contig_28125.2 Carica papaya evm.TU.contig_28125.2 N
FIT Arabidopsis thaliana AT2G28160 N
FIT1 Vitis vinifera VIT_06s0061g00720 N
FIT1 Populus trichocarpa POPTR_0009s01100 N
FIT1 Arabidopsis lyrata fgenesh2_kg.4__753__AT2G28160.1 N
gene24607-v1.0-hybrid Fragaria vesca gene24607-v1.0-hybrid N
gene24608-v1.0-hybrid Fragaria vesca gene24608-v1.0-hybrid N
GLYMA11G19850 Glycine max GLYMA11G19850 N
GLYMA12G08640 Glycine max GLYMA12G08640 N
GLYMA12G30240 Glycine max GLYMA12G30240 N
GLYMA13G39650 Glycine max GLYMA13G39650 N
Gorai.009G090400 Gossypium raimondii Gorai.009G090400 N
GRMZM2G107672 Zea mays GRMZM2G107672 N
GRMZM2G173521 Zea mays GRMZM2G173521 N
GSMUA_Achr6G27600_001 Musa acuminata GSMUA_Achr6G27600_001 N
LPERR04G07210 Leersia perrieri LPERR04G07210 N
MLOC_6707 Hordeum vulgare MLOC_6707 N
MTR_2g084280 Medicago truncatula MTR_2g084280 N
MTR_4g057270 Medicago truncatula MTR_4g057270 N
OB04G17410 Oryza brachyantha OB04G17410 N
OBART04G10120 Oryza barthii OBART04G10120 N
OGLUM04G09730 Oryza glumaepatula OGLUM04G09730 N
OLONG_016577 Oryza longistaminata OLONG_016577 N
ONIVA04G07960 Oryza nivara ONIVA04G07960 N
OPUNC04G08160 Oryza punctata OPUNC04G08160 N
ORGLA02G0343900 Oryza glaberrima ORGLA02G0343900 N
ORGLA04G0072000 Oryza glaberrima ORGLA04G0072000 N
ORUFI04G11150 Oryza rufipogon ORUFI04G11150 N
OS04G0381700 Oryza sativa OS04G0381700 N
Pavir.Ga01979 Panicum virgatum Pavir.Ga01979 N
Pavir.J28741 Panicum virgatum Pavir.J28741 N
PDK_20s1479721g001 Phoenix dactylifera PDK_20s1479721g001 N
PGSC0003DMG400019017 Solanum tuberosum PGSC0003DMG400019017 N
PK26582.1 Cannabis sativa PK26582.1 N
Pm001154 Prunus mume Pm001154 N
PRUPE_ppa018718mg Prunus persica PRUPE_ppa018718mg N
SapurV1A.1382s0060 Salix purpurea SapurV1A.1382s0060 N
Sb06g012030 Sorghum bicolor Sb06g012030 N
Si010468m.g Setaria italica Si010468m.g N
Si010533m.g Setaria italica Si010533m.g N
Solyc06g051550.2 Solanum lycopersicum Solyc06g051550.2 N
TCM_041590 Theobroma cacao TCM_041590 N
Thhalv10016957m.g Eutrema salsugineum Thhalv10016957m.g N
Traes_2AL_088338613 Triticum aestivum Traes_2AL_088338613 N
Traes_2BL_F442E87DD Triticum aestivum Traes_2BL_F442E87DD N
Traes_2DL_47E8C44C6 Triticum aestivum Traes_2DL_47E8C44C6 N