JAMYB (Oryza sativa)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 OS11G0684000 T277294_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
MYB108
M07065_2.00 		Arabidopsis thaliana
RCCWAAYYNNNNHNH
DNDNNNNRRTTWGGY		 Dap-seq
OMalley et al.(2016)
BOS1_col_a 		0.779 0.828
MYB62
M07027_2.00 		Arabidopsis thaliana
NHRCCTAAYTWNHNN
NNDNWARTTAGGYDN		 Dap-seq
OMalley et al.(2016)
MYB62_col_a 		0.756 0.806
MYB62
M07028_2.00 		Arabidopsis thaliana
HNKRCCTAACTHH
DDAGTTAGGYMND		 Dap-seq
OMalley et al.(2016)
MYB62_colamp_a 		0.756 0.806
MYB116
M07014_2.00 		Arabidopsis thaliana
NRCCTAAYTWNWNNN
NNNWNWARTTAGGYN		 Dap-seq
OMalley et al.(2016)
MYB116_col_a 		0.711 0.763
MYB116
M07015_2.00 		Arabidopsis thaliana
HNTRCCTAACTHH
DDAGTTAGGYAND		 Dap-seq
OMalley et al.(2016)
MYB116_colamp_a 		0.711 0.763
MYB05_ANTMA
M11067_2.00 		Antirrhinum majus Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$MYB305_Q3 		0.696 0.806
MYB57
M01072_2.00 		Arabidopsis thaliana
RCCTAAYT
ARTTAGGY		 PBM
Sullivan et al.(2014)
pTH9748 		0.688 0.742
MYB57
M07059_2.00 		Arabidopsis thaliana
YNTACCTAACTHHH
DDDAGTTAGGTANR		 Dap-seq
OMalley et al.(2016)
MYB57_col_a 		0.688 0.742
MYB57
M07060_2.00 		Arabidopsis thaliana
ACCTAAY
RTTAGGT		 Dap-seq
OMalley et al.(2016)
MYB57_colamp_a 		0.688 0.742
MYB24
M02311_2.00 		Arabidopsis thaliana
RCCDAMYNN
NNRKTHGGY		 PBM
Weirauch et al.(2014)
pTH8662 		0.672 0.774
Q2TCH0_PETHY
M11072_2.00 		Petunia x hybrida Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$PH4_01 		0.668 0.634
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
OS11T0684000-01 Myb 31 78
OS11T0684000-01 Myb 84 129

Links

Other Myb/SANT family TFs
Other Oryza sativa TFs

568 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BRADI1G69207 Brachypodium distachyon BRADI1G69207 I
BRADI3G59300 Brachypodium distachyon BRADI3G59300 N
F775_28442 Aegilops tauschii F775_28442 N
GRMZM2G130459 Zea mays GRMZM2G130459 N
LPERR02G26580 Leersia perrieri LPERR02G26580 N
MLOC_10221 Hordeum vulgare MLOC_10221 I
MLOC_76689 Hordeum vulgare MLOC_76689 N
OB02G39430 Oryza brachyantha OB02G39430 N
OB03G19620 Oryza brachyantha OB03G19620 I
OBART02G32450 Oryza barthii OBART02G32450 N
OMERI02G31100 Oryza meridionalis OMERI02G31100 N
OPUNC02G30010 Oryza punctata OPUNC02G30010 N
ORGLA02G0280000 Oryza glaberrima ORGLA02G0280000 N
ORGLA03G0090300 Oryza glaberrima ORGLA03G0090300 I
ORUFI02G34150 Oryza rufipogon ORUFI02G34150 N
OS02G0747600 Oryza sativa OS02G0747600 N
OS03G0232200 Oryza sativa OS03G0232200 I
Pavir.Aa00475 Panicum virgatum Pavir.Aa00475 N
Pavir.Ab02943 Panicum virgatum Pavir.Ab02943 N
Sb04g027940 Sorghum bicolor Sb04g027940 N
Si017580m.g Setaria italica Si017580m.g N
Traes_4AS_93BB8FB3E Triticum aestivum Traes_4AS_93BB8FB3E I
Traes_4BL_D4491E3AB Triticum aestivum Traes_4BL_D4491E3AB I
Traes_4DL_63ACC4A09 Triticum aestivum Traes_4DL_63ACC4A09 I
Traes_6AL_CE4E76E1A Triticum aestivum Traes_6AL_CE4E76E1A N
Traes_6BL_340C2A897 Triticum aestivum Traes_6BL_340C2A897 N
Traes_6DL_2BAA4B7AA Triticum aestivum Traes_6DL_2BAA4B7AA N
TRIUR3_24654 Triticum urartu TRIUR3_24654 N